Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4072g00058 ATGAGGAATCCTCGCAGTGACACGAATGGATTGAAGAAAGGCACATGGACGCCAGAAGAAGACCGCAAGCTCATTGCTTATGTTACTAGGTATGGCTGTTGGAATTGGCGCCAACTCCCCAGATTCGCAGGTCTTGCCAGGTGTGGGAAGAGTTGCCGGCTGAGGTGGCTCAATTACCTGAGGCCCGACATTAAAAGAGGCAACTACACTAAGGAAGAAGATGAACTTATCATCGAACTCCACCACCAGCTTGGTAACAGATGGTCTGCTATAGCAGCTAAGTTACCGGGAAGGACAGACAACGAAATAAAGAACCACTGGCACACCAACCTCAAGAACACGCGCAGAAGTCAACCTCAAAACAAGTCAGTCACAAATGACGACGACAAGGATATTGACACTGTCGTCAAGCCAGGCAATCAATATCATTCTCAAGGTTTCTCGGACTCCGAAACTTTCAAGGTCGACGCCGACGATCATGGGAAATCCGCGGGGTCTGAATCAACCTCGAGCAAATCCTCCTGCGTAACGACGTCGGAGAGTAACCTGGATTTGGCGAGAGATCATGAGTTCTCTTTTCTGGATGCGTATTCCGGGCCAACGAGTGGGAATTTCTGGACGGATCCACCTCTTTTTCATTCTGATGATCTCCCTTACTACCCTGATCCTGAGTTTACGCCGCCCGAGACTGAAGCTCAAGCCTCTTCCCCTATCTCCAACGTGGCACAACTTTGGACTCACAATTTCTACGACCAATATTGTGGTCTCTTCTGCAATCCTGATCAATAG 789 0.4905 MRNPRSDTNGLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWLNYLRPDIKRGNYTKEEDELIIELHHQLGNRWSAIAAKLPGRTDNEIKNHWHTNLKNTRRSQPQNKSVTNDDDKDIDTVVKPGNQYHSQGFSDSETFKVDADDHGKSAGSESTSSKSSCVTTSESNLDLARDHEFSFLDAYSGPTSGNFWTDPPLFHSDDLPYYPDPEFTPPETEAQASSPISNVAQLWTHNFYDQYCGLFCNPDQ 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4072g00058 262 MobiDBLite consensus disorder prediction 122 136 - -
Pral4072g00058 262 Gene3D - 68 136 - -
Pral4072g00058 262 Gene3D - 5 65 - -
Pral4072g00058 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Pral4072g00058 262 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Pral4072g00058 262 CDD SANT 68 111 IPR001005 -
Pral4072g00058 262 SMART sant 65 113 IPR001005 -
Pral4072g00058 262 SMART sant 12 62 IPR001005 -
Pral4072g00058 262 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Pral4072g00058 262 FunFam MYB-related transcription factor 12 65 - -
Pral4072g00058 262 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Pral4072g00058 262 CDD SANT 15 60 IPR001005 -
Pral4072g00058 262 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 182 - -
Pral4072g00058 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Pral4072g00058 262 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Pral4072g00058 262 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Pral4072g00058 262 MobiDBLite consensus disorder prediction 111 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4072g00058 Pral-Chr4072 405155 406147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4072g00058 2 154 MYB Transcription Factor Family AT2G31180 56.209 1.86e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4072g00058 Myb_DNA-binding 8.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4072g00058 K09422 - pop:7497409 243.432