Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4072g00057 ATGCCCAGTCATACACTCTTCAATATCAAATGTCTTAGTTGTTTCTGTGAAGCCATGGACAATATGAAGAACCCATGCCGTTTTCTCTCTCTTCTTGTCATATGTTTCTTTTTTGGCACCATACCTTCTCTCGCAACTGATACCATCTCTGCAAATCAAACTCTTTCTGGAGATCAAACTATCATCTCATCATGTGGTGTCTTCGAGTTGGGTTTCTTCAAGCCAGGTAAGTCCTCAAATTACTACATAGGCATCTGGTATAAAAAGGTCTCTCAACAGACCATAGTTTGGGTCGCAAACAGAGACAGACCTATCTCTGATAAAAATTCGGCCAAGTTAGTTATATCAAATGGCAATTTGGCTCTCCTCAGCGAGTCTCAAATCCCTGTTTGGTCGACGAATTTGACTTCCTCCACCTCAAAGTCTGTTGTTGCTGTCCTCCTAGATTCTGGGAATCTCGTCCTCAGAGACAAGCCAGAATCTTCAGAAAACTTGTGGCAGAGTTTTGATAACCCGACCAACACCTTTCTTCCTGGTGGAAAAATTAAACTCAACAAAAAGACGAAACAACCTCAACATCTCACTTCATGGAAGAACATTGAGGATCCTGCGATGGGTCTCTTCTCTCTGGAGCTAGACCCGAAAGGAACCAACTCGTACTTAATTCTTCGGAACAAGTCAGAAGAGTATTGGACGAGTGGTCCATGGAATGGCCAAATTTTCAGCTTGGTCCCTGAAATGAGGTTAAATTTCTTATACAATTTCACCTTTGTTTCAAACGAGAATGAGAGCTATTTCACTTACTTCATGTATAACTCTTCTATTATATCTCATTTGGTGATGGATGTGTCGGGGCAAATTCAGCAACTCTCATGGCTAGAAAGCACCAAGCAGTGGAATTTGTTTTGGTCTCAGCCAAGACGACAGTGTGAAGTTTATGCTTTTTGTGGCTCTTTCGGGAGGTGCAATGAGAATTCCCTGCCCTTTTGTTCTTGCTTGACCGGTTTCGAGCCAAAGTCTCAAACTGATTGGGATCTGCAGGATCACTCAGGTGGGTGTGTGAGGAAAACCAAGTTGCAATGTGAGAATCCAACATCACCTAACAGAGAGAAAGACAGGTTTCTGGAAATGCCAAACTTGGCCTTACCTAAACATGCACAATCTATAGGAGTAGGGAATGCTGGTGAATGCGAATCCACGTGCTTTAACAATTGCTCTTGTGTTGCTTATGCTTATGACAAAGATGGCTGCTCAATTTGGCATGGAGATTTAATTAGTCTGCAGCAACTTTCTCAAGATGAGAGTAATGGAGAAACATTATTTCTCAAAATTGCTGCTTCTGAGTTTTCAGATGCTAAACAGAAGAAGCAAGGAATTATTGGTATTGTTATAGGCGTGGTTGGGGGCATGGGGGTTCTCCTAGCAATTTGCCTCTTTGTGACGATGAGAAGAAAAAAGAGACTAGTTGGCTTAGGAAGATCGGTGGTGGGTTCATCGACGGCATTTGGGCATTGTGGAAAAATTATTGGTATTGTAGTGGGCATTGTAAGTGGTCTATGGGTTCTCCTGGTCATTCTGCTGTTTGTGATAACCAGAAGAAGGAGAAGGATGGTTGGAAAAGGAAAATCGGTCGAGGGTTCGTTGATGGCATTTGGGTACAGAGATTTACAAAATGCAACCAAGAATTTCTCTGAAAAACTAGGAGTAGGAGATTTTGGTTCTGTTTTCAGAGGCACATTGCCGGATTCCAGTGTCATAGCAGTGAAGAAGCTTGAAAGCATAAGCCAAGGCGAGAAACAGTTTCGATCGGAAGTCAGTAATATAGGTACAGTCCAACATGTGAATCTTGTTCAACTCCGTGGGTTCTGCTCTGAAGGCAACAGAAAGCTTCTGGTTTATGATTACTTGCCAAATGGCTCATTGGACGCCCATCTGTTTCAAGAAAAGAACTCCAAGAAATTAGAATGGAAATTAAGGTACCAAATTGCCTTAGGAATAGCCCGGGGACTAACTTACCTCCATGAAAAGTGCAGAGACTGCATCACACACTGTGACATAAAGCCAGAAAACATCCTTTTAGATTCTGATTTTTGCCCAAAAGTTGCAGACTTTGGCCTCACAAAGCTAGTTGGAATGGAAATCAACAGAATCCTCACAACCATGAGAGGGACAAGAGGTTATCTTGCCCCAGAGTGGATTTCTGGTGTGGCTATCACACCAAAAGTTGATGTTTACAGTTACGGAATGATGCTATTTGAATTGGTGTCAGGAAGAAGAAACTCTGAGCCATCTAAAGATGGCCAAGTGAGGTTCTTCCCTACATGGGCTGCAAAGGTAGTAATCCAAGGAGGCGATGTTCTTGACCTTTTGGATCCTACGTTAGAGCGGAACGCAGACATTAAGGAGCTGACTAGGATAATAAAACTTGCTTCATGGTGTGTACAAGATGATGAGTTAAACAGGCCATCCATGTGTCAGATAGTTCCAATTCTTGAGGGATTTTTGGATATGAATTTGCCTCCACTTCCAAGATCCCTCCTACTGTTTGTTGACAGCTAG 2559 0.4252 MPSHTLFNIKCLSCFCEAMDNMKNPCRFLSLLVICFFFGTIPSLATDTISANQTLSGDQTIISSCGVFELGFFKPGKSSNYYIGIWYKKVSQQTIVWVANRDRPISDKNSAKLVISNGNLALLSESQIPVWSTNLTSSTSKSVVAVLLDSGNLVLRDKPESSENLWQSFDNPTNTFLPGGKIKLNKKTKQPQHLTSWKNIEDPAMGLFSLELDPKGTNSYLILRNKSEEYWTSGPWNGQIFSLVPEMRLNFLYNFTFVSNENESYFTYFMYNSSIISHLVMDVSGQIQQLSWLESTKQWNLFWSQPRRQCEVYAFCGSFGRCNENSLPFCSCLTGFEPKSQTDWDLQDHSGGCVRKTKLQCENPTSPNREKDRFLEMPNLALPKHAQSIGVGNAGECESTCFNNCSCVAYAYDKDGCSIWHGDLISLQQLSQDESNGETLFLKIAASEFSDAKQKKQGIIGIVIGVVGGMGVLLAICLFVTMRRKKRLVGLGRSVVGSSTAFGHCGKIIGIVVGIVSGLWVLLVILLFVITRRRRRMVGKGKSVEGSLMAFGYRDLQNATKNFSEKLGVGDFGSVFRGTLPDSSVIAVKKLESISQGEKQFRSEVSNIGTVQHVNLVQLRGFCSEGNRKLLVYDYLPNGSLDAHLFQEKNSKKLEWKLRYQIALGIARGLTYLHEKCRDCITHCDIKPENILLDSDFCPKVADFGLTKLVGMEINRILTTMRGTRGYLAPEWISGVAITPKVDVYSYGMMLFELVSGRRNSEPSKDGQVRFFPTWAAKVVIQGGDVLDLLDPTLERNADIKELTRIIKLASWCVQDDELNRPSMCQIVPILEGFLDMNLPPLPRSLLLFVDS 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4072g00057 852 SMART ntp_6 369 444 IPR003609 -
Pral4072g00057 852 FunFam Serine/threonine-protein kinase 41 169 - -
Pral4072g00057 852 ProSiteProfiles PAN/Apple domain profile. 361 445 IPR003609 -
Pral4072g00057 852 SMART blect_4 52 172 IPR001480 -
Pral4072g00057 852 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 237 IPR036426 -
Pral4072g00057 852 SUPERFAMILY Protein kinase-like (PK-like) 546 845 IPR011009 -
Pral4072g00057 852 ProSiteProfiles Protein kinase domain profile. 561 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4072g00057 852 PANTHER OS07G0415500 PROTEIN 28 843 - -
Pral4072g00057 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 681 693 IPR008271 GO:0004672|GO:0006468
Pral4072g00057 852 Gene3D - 42 169 IPR036426 -
Pral4072g00057 852 ProSitePatterns Protein kinases ATP-binding region signature. 567 590 IPR017441 GO:0005524
Pral4072g00057 852 Pfam Protein kinase domain 564 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4072g00057 852 ProSiteProfiles Bulb-type lectin domain profile. 46 168 IPR001480 -
Pral4072g00057 852 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 636 841 - -
Pral4072g00057 852 CDD TM_EGFR-like 506 536 - -
Pral4072g00057 852 CDD PAN_AP_plant 357 445 - -
Pral4072g00057 852 Pfam S-locus glycoprotein domain 231 340 IPR000858 GO:0048544
Pral4072g00057 852 Pfam PAN-like domain 369 426 IPR003609 -
Pral4072g00057 852 FunFam Receptor-like protein kinase 4 529 635 - -
Pral4072g00057 852 Gene3D Transferase(Phosphotransferase) domain 1 636 838 - -
Pral4072g00057 852 Pfam D-mannose binding lectin 94 198 IPR001480 -
Pral4072g00057 852 PIRSF SRK 19 852 IPR024171 GO:0004674
Pral4072g00057 852 SMART serkin_6 561 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4072g00057 852 CDD B_lectin 52 172 IPR001480 -
Pral4072g00057 852 Gene3D Phosphorylase Kinase; domain 1 528 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4072g00057 Pral-Chr4072 389797 392461 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4072g00057 504 838 Receptor kinase-like Gene Family AT1G56120 42.229 8.27e-72 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral4072g00057 Pkinase 8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4072g00057 - - gmx:100305421 1140.18