Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4072g00055 ATGGAGAACCTGTGGTGCTTTCTCTCTGTTGTTCTCCTCTGTTTCTCTTTCCACACCGTACCTTCGCTGGCTGCTGATACCATCTCTGCAAATCAAACTCTTTCTGGGGATCAAACCATCATCTCATCCGGCGGTGTCTTCGAATTGGGTTTCTTCAAGCCAGGTAACTCCTCCAACTACTATATAGGCATCCGGTATAAAAAGATCTCTCAACCGACCATTGTATGGGTCGCAAACAGAGACAGCCCCGTCTCTGATAAAAATTCAGCCAAATTAGTTGTATCAAACGGTAATTTGATTCTCCTCAACGGGTCCCAAATCCCAGTTTGGTCGACAAACTTGACTTCCACCACATCAAAGTCTGTTGTTGCTGTCCTCCTGGATTCTGGGAATCTCGTCCTCAGAGACAAGCCCGAGTCTTCAGAAAACTTATGGCAGAGTTTTGATAACCCAACCGACACGTGGCTTCCTGGAGGTAAAATTAAACTCGACAATAAAACGAAAAAGCCGCAATATCTCACTTCATGGAAGAACCAAGATGATCCAGCGACGGGTCTCTTCTCCCTCGAGCTAGACCCGAAAGGAACCACATCGTACTTAATTCTTTGGAACAAGTCTGAAGAGTATTGGACAAGTGGTCCTTGGAATGGCCAAATTTTCAGCTTGGTTCCTGAAATGAGGGCGAATTTCTTATACAATTTCACCTTTGTTTCAAACGAGAACGAGAGCTATTTCACTTACTCCATGTATAACTCTTCTATTATATCTCGTTTCGTGATGGGCATCTCGGGACAGATCCAGCAACTCTCATGGCTAGAAAGCACCAAGCAGTGGAATTTGTTTTGGTCTCAGCCAAGACGACAGTGTGAAGTTTATGCTTTTTGTGGCTCTTTTGGGAGTTGCAATGAGAATACCCAGCCATTTTGTACTTGCTTGACCGGTTTCGAGCCAAAGTCTCAAACTGATTGGGATCTGCAGGATCACTCAGGTGGGTGTGTGAGGAAAACCAAGTTGCAATGTGAGAATCCAACATCACCTAACAGAAAGAACGATAGGTTTCTGGCAATGCCAAACGTGGCCTTACCTAAAAATGCACAATCTGTGGGAGAAGGGAATGCTGGTGAATGCGAATCCATGTGCTTAAACAATTGCTCTTGTGCTGCTTATGCTTATGACGGTAACGGTTGTTCTGTTTGGAATGGAGATTTATTAAGTCTGCAACAACTTTCTCAAGATGACAGCAATGGAGGAACCTTATATCTAAAGCTTGCAGCTTCTGAGTTTTCTGATACTAAACGGAAAAGTGGAGAAATTATTGGTATTGTGGTGGGCATTGTAGGTGGTTTAGGGGTTCTCCTGGCCATTCTGTTATTTGTGATAATCAGAAGAAGAAGAATTGTTGGAAAAGGAAAATCGGTGGAGGGTTCATTAATGGCATTTGGGTACAGAGACTTACAAAATGCAACCAAGAATTTCTCTGAAAAACTAGGAGGAGGAGGTTTTGGTTCTGTTTTCAGAGGCACATTGGCGGATTCCAGTGTCATAGCAGTGAAAAAGCTTGAAAGCATAAGCCAAGGTGAGAAACAGTTTCGATCAGAAGTCAGTACTATAGGTACAGTCCAACATGTGAATCTTGTTCGTCTTCGTGGGTTCTGCTCTGAAGGCAACAGAAAGCTTCTGGTTTATGATTACATGCCAAATGGTTCATTGGACGCCCATCTGTTTCAAGAAAAGAACTCCAAGAAATTAGAATGGAAATTAAGGTACCAAATTGCTCTAGGAATCGCAAGGGGACTAACTTATCTCCACGAGAAGTGCAGAGACTGCATCATACATTGTGACATAAAGCCAGAAAACATTCTTTTAGATTCTGATTTTGGCCCAAAAGTTGCAGACTTTGGCCTCGCAAAACTAGTTGGAAGGGATTTCAGCCGAGTCCTCACAACCATGAGAGGGACAAGAGGCTATCTTGCCCCAGAGTGGATTTCCGGTGTGGCTATCACTGCAAAAGCTGATGTTTACAGCTACGGAATGATGCTTTTTGAATTTGTGTCGGGTAGAAGGAATTCCGAGGCATCTGAAGATGGTCAAGTGAAGTTCTTTCCTACATGCGCCGCAAATGTGGTAATCCAAGGAGGCGATGTTCTTGACCTTCTAGACCCTGCCTTGGAGCGAAATGCAGACGCTGAAGAGCTGACTAGGATAATAAAACTTGCTTCCTGGTGCGTGCAAGATGAAGAGAGTCACAGGCCATCCATGGGTCAGATAGTTCAAATACTTGAGGGTGTTTTGGATGTGAATCTGCCTCCTATTCCAAGATCCCTCCAAGTGTTTGTTGACAACCAGGAGAACATAGTTTTTTTCACTGACTCAAGCTCCAACCAGAGTTCGCATACAAGAAGCAACACCTCAGCAGTATCTGCTCAGGCCAAAAGCAACATCTCATCCGCAAGCTCCAAGTCCTCAAGAGAAAATTAG 2478 0.4399 MENLWCFLSVVLLCFSFHTVPSLAADTISANQTLSGDQTIISSGGVFELGFFKPGNSSNYYIGIRYKKISQPTIVWVANRDSPVSDKNSAKLVVSNGNLILLNGSQIPVWSTNLTSTTSKSVVAVLLDSGNLVLRDKPESSENLWQSFDNPTDTWLPGGKIKLDNKTKKPQYLTSWKNQDDPATGLFSLELDPKGTTSYLILWNKSEEYWTSGPWNGQIFSLVPEMRANFLYNFTFVSNENESYFTYSMYNSSIISRFVMGISGQIQQLSWLESTKQWNLFWSQPRRQCEVYAFCGSFGSCNENTQPFCTCLTGFEPKSQTDWDLQDHSGGCVRKTKLQCENPTSPNRKNDRFLAMPNVALPKNAQSVGEGNAGECESMCLNNCSCAAYAYDGNGCSVWNGDLLSLQQLSQDDSNGGTLYLKLAASEFSDTKRKSGEIIGIVVGIVGGLGVLLAILLFVIIRRRRIVGKGKSVEGSLMAFGYRDLQNATKNFSEKLGGGGFGSVFRGTLADSSVIAVKKLESISQGEKQFRSEVSTIGTVQHVNLVRLRGFCSEGNRKLLVYDYMPNGSLDAHLFQEKNSKKLEWKLRYQIALGIARGLTYLHEKCRDCIIHCDIKPENILLDSDFGPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEASEDGQVKFFPTCAANVVIQGGDVLDLLDPALERNADAEELTRIIKLASWCVQDEESHRPSMGQIVQILEGVLDVNLPPIPRSLQVFVDNQENIVFFTDSSSNQSSHTRSNTSAVSAQAKSNISSASSKSSREN 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4072g00055 825 Pfam Protein kinase domain 493 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4072g00055 825 Gene3D - 20 148 IPR036426 -
Pral4072g00055 825 PIRSF SRK 1 813 IPR024171 GO:0004674
Pral4072g00055 825 FunFam Serine/threonine-protein kinase 457 564 - -
Pral4072g00055 825 Gene3D Phosphorylase Kinase; domain 1 460 564 - -
Pral4072g00055 825 ProSitePatterns Protein kinases ATP-binding region signature. 496 519 IPR017441 GO:0005524
Pral4072g00055 825 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Pral4072g00055 825 FunFam Serine/threonine-protein kinase 20 148 - -
Pral4072g00055 825 SMART blect_4 31 151 IPR001480 -
Pral4072g00055 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Pral4072g00055 825 CDD B_lectin 31 151 IPR001480 -
Pral4072g00055 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 216 IPR036426 -
Pral4072g00055 825 SMART serkin_6 490 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4072g00055 825 ProSiteProfiles Protein kinase domain profile. 490 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4072g00055 825 SUPERFAMILY Protein kinase-like (PK-like) 475 797 IPR011009 -
Pral4072g00055 825 MobiDBLite consensus disorder prediction 791 825 - -
Pral4072g00055 825 Pfam D-mannose binding lectin 73 177 IPR001480 -
Pral4072g00055 825 ProSiteProfiles PAN/Apple domain profile. 340 424 IPR003609 -
Pral4072g00055 825 FunFam Serine/threonine-protein kinase 565 768 - -
Pral4072g00055 825 SMART ntp_6 348 423 IPR003609 -
Pral4072g00055 825 PANTHER OS07G0415500 PROTEIN 7 772 - -
Pral4072g00055 825 Gene3D Transferase(Phosphotransferase) domain 1 565 768 - -
Pral4072g00055 825 CDD STKc_IRAK 496 762 - -
Pral4072g00055 825 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Pral4072g00055 825 CDD PAN_AP_plant 336 424 - -
Pral4072g00055 825 Pfam PAN-like domain 348 405 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4072g00055 Pral-Chr4072 371377 374360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4072g00055 449 770 Receptor kinase-like Gene Family AT5G20050 41.061 3.09e-80 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral4072g00055 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4072g00055 - - gmx:100782119 1222.22