Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4072g00052 ATGAAGAACTGCGAGCTGTGCAGGGTTCCGGCGAGGACCTACTGTGAATCCGACCAGGCTAGTTTATGTTGGGACTGCGATGCAAAGGTTCACGGAGCTAATTTCTTGGTTGCCAGGCACTCCCGGACCCTTCTATGTCATGCGTGCCAGTCTCCAACGCCATGGAAGGCCTCCGGTGCTGTTCTCGGAAACACCGTTTCGGTTTGCCGGAACTGTGACGGAGGAATGAACTTAAGCGATGAGGACGGCGAGGGAAGCGAAGGAGGCAATGACACCGAAACAAACTCGGAAGACGATGACGACGATGCCATGCTTGACGAAAACAACGACGATGACGCCGACGGCGATGAGGGAGGCGGTGATGGGGAGGCCGATCATCAAATAGTCCCCTGGTCCTCCACGACGCCCCCACCGCCTGCAACTTCTTCGAGCAGCGATGAGTCTAATAACGGCAACAGAAATGTCTCTGAATCACGAACATCAGTTTCCTCGAAACGAAGGCGCGAAAATGCATCCAAAAATAATTTCCAGGGTCCAACTGATGGCGGGTGA 552 0.5435 MKNCELCRVPARTYCESDQASLCWDCDAKVHGANFLVARHSRTLLCHACQSPTPWKASGAVLGNTVSVCRNCDGGMNLSDEDGEGSEGGNDTETNSEDDDDDAMLDENNDDDADGDEGGGDGEADHQIVPWSSTTPPPPATSSSSDESNNGNRNVSESRTSVSSKRRRENASKNNFQGPTDGG 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4072g00052 183 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Pral4072g00052 183 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 165 - -
Pral4072g00052 183 CDD Bbox1_BBX-like 4 45 - -
Pral4072g00052 183 MobiDBLite consensus disorder prediction 76 183 - -
Pral4072g00052 183 MobiDBLite consensus disorder prediction 138 159 - -
Pral4072g00052 183 SMART bboxneu5 1 45 IPR000315 GO:0008270
Pral4072g00052 183 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Pral4072g00052 183 MobiDBLite consensus disorder prediction 84 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4072g00052 Pral-Chr4072 360682 361902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4072g00052 2 141 C2C2-CO-like Transcription Factor Family AT4G27310 46.341 4.47e-35 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral4072g00052 zf-B_box 3.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4072g00052 - - qsa:O6P43_028736 179.104