Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4072g00051 ATGAATTATACAGGACGGGTAGAGCTTTGGCGCTTGGATCTGTTGGACGGAGAATGGGGGACTAGATGGGGCAGGCCAGATAGCAAATGCAAGATATATAACTTCTGTGGGAACTTTGGCAGTTGCAATATTAATAGTTCGCCAACGTGTAGATGTTTGCCCGGATTCATTTCTAAGTCGCAGGGGGAGAATCAGACTCCGTCCTATAAATCTGGAGGCTGTTTCAGAAAACCCACACCATGCGCGCAAAACAAGACCACATTCATAAACCTGAAGAGGGTGAAAGTGAGAAAACCAGACACAAAAGTCTCCGCAGCCAATGAAACAGAGTGCCGATCTCAGTGCGTCAATGGGTGCCCCCCTTGCACCGCTTATTCATACGATGCGTCGACAGATGTCTTTAGTAGGATGTCCGTACCGTGTTCTATTTGGACTTCTGATTTATCTACCCTTCAGGAAGAGGATGATGCGGGCTTTAATCTTTCTGTCCTGGTATATAAACCAGATATAGAACCAACTCCAAGAACCTGCAAACCTTGCGGTGTATTCACAATTCCTTATCCGCTAAGCACTGAACCAAGTTGTGGTGATCCCATTTACTCTCATTTTAAGTGCGACTCGCCAACCGGGCAGGTTAGTTTCATTGTGGGAGAAGAGCCTTATAGAGTTACTAACATTGATCCAGACGAGAGATCGTTCTCTATCCAAATCAAAGATTCGGGTGATTGTCCTCCAAGCAATCTCGGGCGTTGGCTTGGTCCTTCATTTGGGGTGACTCAACAGTGCGATGAGGGAGACGAAGCAAAGACACTAAAGATTAATTGGTCTGCTCCAGATGAACCTCCATGTAATAACTCCGTAGACTGCGAGGGCTGGTCTCATTCAACTTGCAACGCAACCAGTAATGGAAATGGAAGATGCCTCTGCGATGAAAAATATTACTGGAATCGCCTCAATTTAAGCTGCAATCAAGTAGAGCCTCCAAGAAGAATAAGCTCTAAAGTTTTGATATTAGTGGTGACATTTTCAAGCTTGATTTTCTTGGCCTGCATTACAACTTCTGCTTACATTTGGAGAAGAAAAGTAGCCTTTGAGCAAGAAAGGGGACAAAATCAAAGAACGAGAGATGCCCTGCATGACAGTGAGAGGTATATCAAAGATTTCATAGACGCCGAGAGGACAGAGGAAAAGGACGGTGAAGGGATAGAGGTACCTTATTTGGATTTTAATAGCATCCTTTTAGCCACGGATAACTTCTCAGATGTGAACAAGCTTGGACGTGGGGGTTATGGACCTGTCTACAAGGGCAAGCTTCAAGGAGGTCAAGATATTGCAGTCAAGAGGCTTTCAAGCGTTTCTTCACAAGGAATGAAGGAATTCAAGAACGAAGTTGTCTTGATATCCAAACTTCAACATCGGAACCTTGTTAGACTTTTGGGCTATTGCATTACAGGACAAGAAAAAATATTACTTTATGAATACATGCCAAACAAGAGCTTAGACACATTCTTATTTGATCGTACACAAAGAGTGATTTTGGACTGGCAAATGCGTTTTGACATAATTTTAGGAGTTGCTAGAGGAATGTTATATCTTCATCAAGACTCTAGATTGAGAGTGATTCATAGGGATTTGAAAATTAGTAATATTCTTTTGGATGAGGAGATGCAACCAAAAATTTCAGATTTTGGACTTGCAAAAATATTTGGAGGCAAGGAAATTGAGGCTAACACTGAAAGAATAGTTGGAACTTATGGATACATGGCTCCAGAATATGCATTGGATGGATTTTTCTCGATCAAATCAGATGTTTTCAGTTTTGGGGTTGTAATGCTTGAAATTATCAGTGGAAAAAAGAACACGGGATTCTTTCAATCCAAACAAAGTTCCAGCCTTCTGGGTTATGCATGGAGGCTATGGACGGAGAATAACCTCTTGGATTTAATGGATCGATCTTTGAATGAAAGTTGCAATGCAAATCAATTCATCAAGTGTGCACAAGTAAGTCTGTTGTGTGTGCAAGATGAACCAGGAGAGAGACCCACCATGTCGCAAGTATTAATAATGCTTGAAAGTGAGACTGCGAGCCTTCCAACTCCAAAGCAACCGACCTTTTTTATGAGCAGTAGCAGGGGCCTTTCTAGCTCTGCTTCTTCTTCCAGTAGACCTGAAGGAATTCTTCCTACTGACAGTACCTATCAACAAGATACTTTGAAGATCGGTGAAAGCCTTCATGACAGGGAAGATGCCGCTGCCAACCTTGTCACCACGGGAGGTCAGTTTGAACTGGGTTTCTTTTCCCCTGCAGGAAGCCAAAACAGATACCTAGGAATATGGTATCATGGGATAGAACCGCAAACTGTTGTCTGGGTTGCTAACAGAGACAACCCCATTCCTCATTCAAGAACTGGAATTTTCCAACTTTCGCTAGATGGAAATCTCACCGTGTTAGATACAGAAGGAAATCCTTATTGGTCTTACACACCTGAACAAGTATCTTCTCTCGCAAACCTCACAGTGAGGCTTATGGATTCTGGGAACTTAATTCTGGCGGACGACCACTTACAAGCGACCTACTGGCAAAGCTTCCAACACCCTACGGACACATTTTTGGTGGGCATGAAAATGGATGAAGATTTAGTCTTGAATTCTTGGAGAGCCTCTGATGATCCCGGCAGCGGTAATTACACATTTGCAGGTGGAAAAACAGGGGATAGCAACTATACAATCTACGTCAACCAGAACCAAGTTCACTGGGCTGGTGAAACGCGCCAAGATTTCGGCTCAGAAGGGACAATACTTTCGCTCTTGACAAACTTCACCCAAAGGCCTTCAACTTATAAAAACAACAGCATGTCAACAAACTCACCTCGTTCTGATTTTGAGCATACAAGGCTGGTGATGAATTATACAGGACAGGTAGAGCTTTGGCACTGGGATCATATCGAAGGATGGGGGACTAGATGGAACAAGCCAGATAGCAAATGCAAGATACATAACTTCTGTGGAAACTTTGGCAGTTGCAATATGAATAATTCGCCATACTGTAGATGTTTGCCTGGATTCGCTTCTAAGTCGCAGGGGGAGAATCAGGTTCCATCCTCTGAAGCTGGAGGTTGCTTCAGAAAAACAACATCATGCGGGCAAAACACGACAGCGTTCATAGACTTGAAGAACGTGAAAGTGAGAAAAGCAGACAAAGCAGTCTACGCATCGAATTCAACAGAGTGCCAATCTAAGTGCCTTAATCTCAATGGGTGCCCAAATTGCACAGCTTATTCATATGATGCATCAACAAATTATGATAGGACGTTCTTATCGTGTTCTATTTGGACCGCCGATTTGCCTACCCTTCAAGAGGAGATTGATAAGGGTGTTAATATTTCTGTCCCGATAAGTAAACTAGATATAGAACCTACTCCAAGGACGTGCAAGCCTTGCGGTGTATTCACAATTCCTTATCCGCTGAGCACCGAACCAAGTTGTGGTGATCCCATTTACGCCAATTTCACATGCGACTCGCCAACCGGGCTGCTTAATTTCACAGTGGGAGAAGAGAGTTATAGAGTTACTAACATTGATCCAGACGAGAGATCGTTCTCTATTCAAATCAGACATTCGGATAATTGTGCTGCAAGCAGTCTAGGGCGTCGGCTCGATCCGCCATTTAGTGTGACTCAACAGTGCGATGGTGAGGCAAAGACAATAAAGATTAATTGGGATCCTCCAGGTGAACCTCCCTGTACTAACTCCACAGACTGCGAGGGCTGGTCTCATTCAACTTGCAAGGCAACCAGTAACGGAAATGGAAGATGCCTCTGCGATGAAAAATATCAATGGAATGGCCACAGTTTAAGCTGTACGCAAGAGCCTCCGAGAAGAAACAGCCCTAGAGTTCTGATATTAGCGGTGACACTTTCAACCTTGATTTTCTTGGCCTGCATTATAACTTCTGCTTACATTTGGAGAAGAGTAGCCTCTAATCAAGAAAAGGGAGAAAATCAAAGAACGAGAGATGTCCTACATGACAATGAGAGATATATCAAAGATTTCATAGACGCCGAGAGGACAGAGGAAAAGGACGGTGAAGGGATAGAGGTACCTTATATGGATTTTAATAGCATCCTTTTAGCCACGGATAACTTCTCAGATGCGAACAAGCTTGGACGTGGGGGTTATGGACCTGTGTACAAGGGCAAGCTTCAAGGAGGTCAAGATATTGCAGTCAAGAGGCTTTCAAGTGTTTCTTCACAAGGAATGAAGGAATTCAAGAATGAAGTTGTCTTGATATCCAAACTTCAACATCGGAACCTTGTTAGACTTTTGGGCTATTGCATTACAGGACAAGAAAAAATATTACTTTATGAATACATGCCAAACAAGAGCTTAGACACATTCTTATTTGATCATACACACAGAGTGATTTTGTACTGGCCAATGCGTGTTGACATAATTTTAGGAGTTGCTAGAGGAATATTATATCTTCATCAAGACTCTAGATTGAGAGTGATTCATAGAGATTTGAAAACTAGTAATATTCTTTTGGATGAGGAGATGCAACCAAAAATTTCAGACTTTGGACTTGCAAAAATATTTGGAGGCAAGGAAACTGAGGCCAACACTGAGAGAGTAGTTGGAACTTATGGATACATGGCTCCAGAGTATGCATTAGACGGATTTTTCTCAATTAAATCAGATGTTTTCAGTTTTGGGGTTGTAATGCTTGAAATTATCAGTGGAAAAAAGAACACGGGATTCTTTCAATCCAAACAAACGTCCAGCCTTCTGGGTTATGCATGGAGGCTATGGACGGAGAATAACCTCTTGGATTTAATGGATCGATCTTTGAATGAAAGTTGCAATGCAAATCAATTCATCAAGTGTGCACAAGTAAGTCTATTGTGCGTGCAAGATGAACCAGGAGACAGGCCCACCATGTCGCAAGTATTGATAATGCTTGAAAGTGAGACTGCGAGCCTTCCAACTCCAAAGGAACCGACCTTTTTTAGGAATAGTGCCAGGGGCCTTTCTAGCTCTGCTTCTTCTTCCAGTAAACCTGAAGGAATTCTTCCCACTGACAGTACCTATCAACAAGGTCGGTAG 5103 0.4276 MNYTGRVELWRLDLLDGEWGTRWGRPDSKCKIYNFCGNFGSCNINSSPTCRCLPGFISKSQGENQTPSYKSGGCFRKPTPCAQNKTTFINLKRVKVRKPDTKVSAANETECRSQCVNGCPPCTAYSYDASTDVFSRMSVPCSIWTSDLSTLQEEDDAGFNLSVLVYKPDIEPTPRTCKPCGVFTIPYPLSTEPSCGDPIYSHFKCDSPTGQVSFIVGEEPYRVTNIDPDERSFSIQIKDSGDCPPSNLGRWLGPSFGVTQQCDEGDEAKTLKINWSAPDEPPCNNSVDCEGWSHSTCNATSNGNGRCLCDEKYYWNRLNLSCNQVEPPRRISSKVLILVVTFSSLIFLACITTSAYIWRRKVAFEQERGQNQRTRDALHDSERYIKDFIDAERTEEKDGEGIEVPYLDFNSILLATDNFSDVNKLGRGGYGPVYKGKLQGGQDIAVKRLSSVSSQGMKEFKNEVVLISKLQHRNLVRLLGYCITGQEKILLYEYMPNKSLDTFLFDRTQRVILDWQMRFDIILGVARGMLYLHQDSRLRVIHRDLKISNILLDEEMQPKISDFGLAKIFGGKEIEANTERIVGTYGYMAPEYALDGFFSIKSDVFSFGVVMLEIISGKKNTGFFQSKQSSSLLGYAWRLWTENNLLDLMDRSLNESCNANQFIKCAQVSLLCVQDEPGERPTMSQVLIMLESETASLPTPKQPTFFMSSSRGLSSSASSSSRPEGILPTDSTYQQDTLKIGESLHDREDAAANLVTTGGQFELGFFSPAGSQNRYLGIWYHGIEPQTVVWVANRDNPIPHSRTGIFQLSLDGNLTVLDTEGNPYWSYTPEQVSSLANLTVRLMDSGNLILADDHLQATYWQSFQHPTDTFLVGMKMDEDLVLNSWRASDDPGSGNYTFAGGKTGDSNYTIYVNQNQVHWAGETRQDFGSEGTILSLLTNFTQRPSTYKNNSMSTNSPRSDFEHTRLVMNYTGQVELWHWDHIEGWGTRWNKPDSKCKIHNFCGNFGSCNMNNSPYCRCLPGFASKSQGENQVPSSEAGGCFRKTTSCGQNTTAFIDLKNVKVRKADKAVYASNSTECQSKCLNLNGCPNCTAYSYDASTNYDRTFLSCSIWTADLPTLQEEIDKGVNISVPISKLDIEPTPRTCKPCGVFTIPYPLSTEPSCGDPIYANFTCDSPTGLLNFTVGEESYRVTNIDPDERSFSIQIRHSDNCAASSLGRRLDPPFSVTQQCDGEAKTIKINWDPPGEPPCTNSTDCEGWSHSTCKATSNGNGRCLCDEKYQWNGHSLSCTQEPPRRNSPRVLILAVTLSTLIFLACIITSAYIWRRVASNQEKGENQRTRDVLHDNERYIKDFIDAERTEEKDGEGIEVPYMDFNSILLATDNFSDANKLGRGGYGPVYKGKLQGGQDIAVKRLSSVSSQGMKEFKNEVVLISKLQHRNLVRLLGYCITGQEKILLYEYMPNKSLDTFLFDHTHRVILYWPMRVDIILGVARGILYLHQDSRLRVIHRDLKTSNILLDEEMQPKISDFGLAKIFGGKETEANTERVVGTYGYMAPEYALDGFFSIKSDVFSFGVVMLEIISGKKNTGFFQSKQTSSLLGYAWRLWTENNLLDLMDRSLNESCNANQFIKCAQVSLLCVQDEPGDRPTMSQVLIMLESETASLPTPKEPTFFRNSARGLSSSASSSSKPEGILPTDSTYQQGR 1700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4072g00051 1700 ProSiteProfiles Protein kinase domain profile. 1382 1668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4072g00051 1700 SMART serkin_6 1382 1653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4072g00051 1700 SMART serkin_6 419 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4072g00051 1700 Pfam S-locus glycoprotein domain 938 1025 IPR000858 GO:0048544
Pral4072g00051 1700 Pfam S-locus glycoprotein domain 2 59 IPR000858 GO:0048544
Pral4072g00051 1700 Gene3D - 731 865 IPR036426 -
Pral4072g00051 1700 ProSiteProfiles Protein kinase domain profile. 419 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4072g00051 1700 MobiDBLite consensus disorder prediction 708 730 - -
Pral4072g00051 1700 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 834 1677 - -
Pral4072g00051 1700 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 384 494 - -
Pral4072g00051 1700 MobiDBLite consensus disorder prediction 1658 1700 - -
Pral4072g00051 1700 Pfam PAN-like domain 81 149 IPR003609 -
Pral4072g00051 1700 Pfam PAN-like domain 1047 1115 IPR003609 -
Pral4072g00051 1700 SUPERFAMILY Protein kinase-like (PK-like) 1365 1679 IPR011009 -
Pral4072g00051 1700 ProSiteProfiles Bulb-type lectin domain profile. 729 863 IPR001480 -
Pral4072g00051 1700 SUPERFAMILY alpha-D-mannose-specific plant lectins 773 920 IPR036426 -
Pral4072g00051 1700 Gene3D Transferase(Phosphotransferase) domain 1 1458 1664 - -
Pral4072g00051 1700 Gene3D Transferase(Phosphotransferase) domain 1 495 701 - -
Pral4072g00051 1700 Pfam D-mannose binding lectin 787 880 IPR001480 -
Pral4072g00051 1700 Pfam Protein tyrosine and serine/threonine kinase 423 687 IPR001245 GO:0004672|GO:0006468
Pral4072g00051 1700 Pfam Protein tyrosine and serine/threonine kinase 1386 1650 IPR001245 GO:0004672|GO:0006468
Pral4072g00051 1700 CDD STKc_IRAK 1388 1654 - -
Pral4072g00051 1700 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1458 1661 - -
Pral4072g00051 1700 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 495 698 - -
Pral4072g00051 1700 SMART blect_4 735 866 IPR001480 -
Pral4072g00051 1700 ProSiteProfiles PAN/Apple domain profile. 1047 1133 IPR003609 -
Pral4072g00051 1700 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 730 863 - -
Pral4072g00051 1700 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 1347 1457 - -
Pral4072g00051 1700 CDD EGF 996 1022 - -
Pral4072g00051 1700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1503 1515 IPR008271 GO:0004672|GO:0006468
Pral4072g00051 1700 CDD B_lectin 754 866 IPR001480 -
Pral4072g00051 1700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672|GO:0006468
Pral4072g00051 1700 Gene3D Phosphorylase Kinase; domain 1 386 494 - -
Pral4072g00051 1700 Gene3D Phosphorylase Kinase; domain 1 1349 1457 - -
Pral4072g00051 1700 ProSiteProfiles PAN/Apple domain profile. 81 177 IPR003609 -
Pral4072g00051 1700 SMART ntp_6 83 165 IPR003609 -
Pral4072g00051 1700 SMART ntp_6 1049 1132 IPR003609 -
Pral4072g00051 1700 SUPERFAMILY Protein kinase-like (PK-like) 402 719 IPR011009 -
Pral4072g00051 1700 CDD STKc_IRAK 425 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4072g00051 Pral-Chr4072 337076 349403 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4072g00051 394 720 Receptor kinase-like Gene Family AT4G05200 54.955 1.02e-119 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4072g00051 PK_Tyr_Ser-Thr 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4072g00051 - - var:108332879 1794.25