Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4072g00050 ATGGATACTTTGAAGATCGGTGAAAGCCTTCATGACAGGGAAGATGCCGCTGCGACCCTTGTCACCACGGGAGAGCAGTTTGAACTTGGTTTCTTTTCCCCTGCTCGAAGCCAAAACAGATACCTTGGAATATGGTATCATGGGATAGAACCGCAAACTGTTGTCTGGGTTGCTAACAGAGACAACCCCATTCCTCATTCAAGAACTGGAATGTTCCAACTTTCGCTAGATGGAAATCTCACCGTGTTAGATACAGAAGGAAATCCTTATTGGTCTTACACGCCTGAACAAGTATCTTCTCTCGCAAACCTCACAGTGAGGCTTATGGATTCTGGGAACTTAATTCTGGCAGACGACCACTTACAAGCGACCTACTGGCAAAGCTTCCAACACCCTACGGACACATTTTTGGTGGGCATGAAAATGGATGAAGATTTAGTCTTGAATTCTTGGAGAGCCTCTGATGATCCCGGCAGCGGTAATTACACATTTGCAGGTGGAAAAACAGGGGATAGCAACTATACAATCTACGTCAACCAGAACCAAGTTCACTGGGCTGGTGAAACGCGCCAAGATTTCGGCTCAGAAGGGACAATGCTTTCGCTGTTGACAAACTTCACCCAAAGGCCTTCTACTTATAAAAACAAAAACATGTCAACAAATGCACTTCGTTCTGACTTTGAGCACACAAGGCTAGTGATGAATTATACAGGACGGGTAGAGCTTTGGCGCTGGGATCAGATCGAAGGAGGATGGGCGACTAGATGGAACAAGCCAGATAGCAAATGCAAGATACATAACGCCTGTGGGAACTTTGGCAGTTGCAATATTAATAGTTCGCCAATCTGTAGATGTTTGCCTGGATTCACTTCTAAGTCGCAGGGGGAGAACCAGGTTCCGTCCTCTGAATCTGGAGGGTGTTTCAGAAAACCAACATCATGCGGGCAAAACACGACAACATTCATACACTTGGAGAAGGTGAAAGTGAGAAAACCAGACAAAAAAGTCAACGCAGCGAACGAAACAGAGTGCCGATCTAAGTGCCTCAATGGGTGCCCCCCTTGCACCGCTTATTCATATGATGCGTCAACAAATGCCTATAGTAGGATGTCCATACCGTGCTCTATTTGGACTTCTGATTTGCCTACCCTCCAAGAAGAGATCGATGCGGGCTTTAATCTTTCTGTCCTGGTAAATAAACCAGATATAGAACCAACTCCAAGAACCTGCAAACCTTGCGGTGTATTCACAATTCCTTATCCGCTAAGCACTGAAGCAAGTTGTGGTGATCCCATTTACTCTCAATTCAAATGTGACTCGCCAACCGGGCAGGTTAGTTTCATTGTGGGAGAAGAGCCTTATAGAGTTACTAACATTGATCCGGACGAGAGATCGTTCTCTATTCAAATCAAAGATTCGGATAATTGTCCTGCAAGCAATCTCGAGCGTTGGCTTGATCTGTCATTTAGCGTGACTCAACAGTGCGATGATGCAGATGAAGCAAAGACACTAAAGATTAATTGGTCTACCCCAGATGAACCTCCCTGTAATAACTCCGTAGACTGTGAGGGCTGGTCTCATTCAACTTGCAACGCAACCGGTAATGGAAATGGAAGATGCCTCTGCGATGAAAAATATAAATGGGATGGCCTCAATTTAAGCCGTACGCAAGAAAAGGGACAAAATCCAAGATCGACAGGGAGCCTACATGACAGTGAGAGATATATCAAAGATTTTATGGACGCTGACAGGTTAGTGGAGAAGGACAGAGAAGCAATAGAGGTACCTTATTTGGATTTTAGTAGCATCCTTTTAGCCACAGATAACTTCTCAGACGCTAACAAGCTCGGACGCGGGGGTTATGGGCCTGTCTACAAGGGAAAGCTTCAAGGAGGTCAAGATATTGCAGTCAAGAGGCTTTCAAGTGTTTCTTCACAAGGAATGAAGGAATTCAAGAATGAAGTCGTCTTGATATCCAAACTTCAACATCGAAACCTTGTTAGACTTCGGGGCTATTGCATTACAGGAGAAGAAAAAATATTACTTTATGAATACATGCCAAACAAAAGCTTAGACACATTCTTATTCGATCGTACACAACGGGTGATTTTGGATTGGCTAATGCGTTTTGACATAATTTTAGGAGTTGTTAGGGGCATGTTATATCTTCATCAAGACTCTAGATTGAGAGTAATTCATAGAGATTTGAAAACTAGTAATATTCTTTTGGATGAGGAGATGCAACCAAAAATTTCAGACTTTGGACTTGCAAAAATATTTGGAGACAAGGATGTTGAGGCTAACACTGAGAGGGTAGTTGGAACATATGGATATATGGCTCCAGAGTATGCATTGGATGGATATTTGTCTATTAAATCAGATGTTTTCAGTTTTGGGGTTATAATGCTTGAAATTATCAGTGGAAAGAAGAACACAGGATTCTTTCAATCCAAACAAACTTCTAGCCTTCTGGGTTATGCATGGAGGCTATGGACGGAGAATAACCTATTGGATTTAATGGATCGATCTTTGAATGAAAGTTGCAATGCAAATCAATTTATCAAGTGTGCACAAGTAAGTCTGTTGTGTGTGCAAGATGAACCAGGAGACCGGCCCACCATGTCGCAAGTATTGATAATGCTTGAAAGTGAGACTGCGAGCCTTCCAACTCCAAAGCAACCGACCTTTTTTACGAACCGTGCCAGGGGCCTTTCTAGCTCTGCTTCTTCTTCCAGTAAACCTGAAGGAATTCTTCCAACTGACAGTAGCTATCAAGAAGGTCGGTAG 2787 0.4331 MDTLKIGESLHDREDAAATLVTTGEQFELGFFSPARSQNRYLGIWYHGIEPQTVVWVANRDNPIPHSRTGMFQLSLDGNLTVLDTEGNPYWSYTPEQVSSLANLTVRLMDSGNLILADDHLQATYWQSFQHPTDTFLVGMKMDEDLVLNSWRASDDPGSGNYTFAGGKTGDSNYTIYVNQNQVHWAGETRQDFGSEGTMLSLLTNFTQRPSTYKNKNMSTNALRSDFEHTRLVMNYTGRVELWRWDQIEGGWATRWNKPDSKCKIHNACGNFGSCNINSSPICRCLPGFTSKSQGENQVPSSESGGCFRKPTSCGQNTTTFIHLEKVKVRKPDKKVNAANETECRSKCLNGCPPCTAYSYDASTNAYSRMSIPCSIWTSDLPTLQEEIDAGFNLSVLVNKPDIEPTPRTCKPCGVFTIPYPLSTEASCGDPIYSQFKCDSPTGQVSFIVGEEPYRVTNIDPDERSFSIQIKDSDNCPASNLERWLDLSFSVTQQCDDADEAKTLKINWSTPDEPPCNNSVDCEGWSHSTCNATGNGNGRCLCDEKYKWDGLNLSRTQEKGQNPRSTGSLHDSERYIKDFMDADRLVEKDREAIEVPYLDFSSILLATDNFSDANKLGRGGYGPVYKGKLQGGQDIAVKRLSSVSSQGMKEFKNEVVLISKLQHRNLVRLRGYCITGEEKILLYEYMPNKSLDTFLFDRTQRVILDWLMRFDIILGVVRGMLYLHQDSRLRVIHRDLKTSNILLDEEMQPKISDFGLAKIFGDKDVEANTERVVGTYGYMAPEYALDGYLSIKSDVFSFGVIMLEIISGKKNTGFFQSKQTSSLLGYAWRLWTENNLLDLMDRSLNESCNANQFIKCAQVSLLCVQDEPGDRPTMSQVLIMLESETASLPTPKQPTFFTNRARGLSSSASSSSKPEGILPTDSSYQEGR 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4072g00050 928 Gene3D Phosphorylase Kinase; domain 1 575 685 - -
Pral4072g00050 928 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Pral4072g00050 928 SMART ntp_6 316 398 IPR003609 -
Pral4072g00050 928 SMART serkin_6 610 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4072g00050 928 CDD STKc_IRAK 616 882 - -
Pral4072g00050 928 CDD EGF 263 290 - -
Pral4072g00050 928 Pfam S-locus glycoprotein domain 203 292 IPR000858 GO:0048544
Pral4072g00050 928 SUPERFAMILY alpha-D-mannose-specific plant lectins 39 186 IPR036426 -
Pral4072g00050 928 Pfam PAN-like domain 314 381 IPR003609 -
Pral4072g00050 928 SUPERFAMILY Protein kinase-like (PK-like) 594 907 IPR011009 -
Pral4072g00050 928 ProSiteProfiles PAN/Apple domain profile. 314 410 IPR003609 -
Pral4072g00050 928 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 686 889 - -
Pral4072g00050 928 Pfam D-mannose binding lectin 53 146 IPR001480 -
Pral4072g00050 928 ProSiteProfiles Protein kinase domain profile. 610 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4072g00050 928 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 129 - -
Pral4072g00050 928 Pfam Protein tyrosine and serine/threonine kinase 614 878 IPR001245 GO:0004672|GO:0006468
Pral4072g00050 928 CDD B_lectin 19 132 IPR001480 -
Pral4072g00050 928 SMART blect_4 1 132 IPR001480 -
Pral4072g00050 928 PIRSF SRK 441 581 IPR024171 GO:0004674
Pral4072g00050 928 PIRSF SRK 1 408 IPR024171 GO:0004674
Pral4072g00050 928 PIRSF SRK 570 926 IPR024171 GO:0004674
Pral4072g00050 928 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 575 685 - -
Pral4072g00050 928 Gene3D Transferase(Phosphotransferase) domain 1 686 893 - -
Pral4072g00050 928 Gene3D - 1 131 IPR036426 -
Pral4072g00050 928 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 100 906 - -
Pral4072g00050 928 MobiDBLite consensus disorder prediction 888 928 - -
Pral4072g00050 928 ProSiteProfiles Bulb-type lectin domain profile. 1 129 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4072g00050 Pral-Chr4072 328265 332700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4072g00050 598 897 Receptor kinase-like Gene Family AT4G23140 56.863 3.49e-122 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4072g00050 PK_Tyr_Ser-Thr 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4072g00050 - - pcin:129313312 1027.31