Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4072g00049 ATGAAAACTGTTGCGGTGGTTCTCTTCTCCTTCACAAACTGGTTGCTGTGCTTTTCTCAGCCCTATTTGGCTCTTGATACTTTAAAGCCTGGAGAAAAGCTTACAGGCAATGAAACCCTTGTTTCAAATGGAGGCAAATTCGAACTGGGTTTCTTTTCCCCTCGACAAGATTCGAGCAAGTACTTGGGAATATGGTACCACGGGTTACAACCACGAACAGTGGTATGGGTTGCAAACAGAGACCACCCTGCTCCAGATTCCACTGCATTTTTTCAAATTGCAGACGATGGAAATCTAATAGTATCAGACATCAACGGAAAAAGCTACTGGTCTTCGGGACTAAAAGCATCTCCGTCCTTAAACCGTACAGTGAAACTCATGACTTCAGGAAACCTGGTATTGTTCGATAACCAGTTGAGTATAAATAATCTCTGGCAGAGCTTTGAACATCCAACGGATACATTTCTACCATTCATGAAAATGAATAGAAACATAAAGTTGACATCCTGGAGAAGGTTTGATGACCCAGCATCTGGGAAATTCACCTTTCAGCTTGCTCAAGCAGGTGACAACAGCTATCTCATTTTGAAAGACCGAGTCCAACTTCACTGGCAAACTTCTGACGCAATGCCCTCGACGATATCGAACTTGCTGACCAACTTCACTCTCAGGCAGAGCCCCCAGTTGAAGAATAACTTCTCGAGGCTGCCTAAGTTGAATAACAACGTCATGAATTCTACGAAACTGGAAGCCGCATATAATCTTACAAGGCTAGTCATGAATTACACAGGGAAGATCGAATTTCAGAGGTACGATATTACGTTTGGAACTGGATGGTCTGTGGGATATGGTGAACCATCTGGACCGTGTAAGATACACGACGCTTGCGGGACCTTTAGTAGCTGCAATGATCAGAATCTCCCTCCCTGCAAGTGTTTGCCCGGATTTCATCCCAAGTCACTGGCGGATAATTCCCTTGGAGAAAGGTTTAACGGGTGTTTCAGGAAAACAGCATCGTGCGAAAGAAAAGACATTGCGTTCCTAAACTTAACGAACATTGAAATTGGAAGCTCGGACACGCCAGTTGATGCAGAAAGCGAAGAAGAATGCCAATCTAAATGCCTTGACAAGTGCCCTCAATGCCAGGCTTATTCATATAATACTAAAATGTTGGATCGGAATTCTCCGTCTTGTTTGATCTGGACTCGGAACTTACCCACTCTCAAAGAACATTCCCCTCAAAGTGGCATTTCTCTTTCTGTCCGGTTACTGATTTCAGACATAGCACCAAATGCCAGGACCTGTGAACCTTGCGGCACAACAGTAGTTCCATATCCACTAAGCACAGGGACAAATTGTGGAGATCCTTTGTACTTCGAGCTAAACTGTGACAATTCAACGGGCGAGGTTAACTTCACGATGCCTGGACTTGGACCAAATCGTGTGGCTAAAATAAATTCAGATGAACGGAAGTTGATTATCCAAATTCAAGGTCCATACATCTGTGATGATAAAGAGAACCAAAGAGTTCAGCTTGATTCACCGTTTAGTGTAACCAACTGGTGCTTTGGTCAAGATAAAATTGAGGTTACTTGGCTTCCACCATTAGAACCTCTCTGTCATAACTCCACAGACTGCAACGATTGGCCACGTTCAACCTGCAATAGTGATTCAAAAGATGGAAAACGAAGGTGCATTTGTAATAAAAACTATTACTGGAACAACTCAACTCTAAATTGCACCCCCATGTCACAAGAGTCGTCTGGAAGAAAAAAACCACTCACTCTAATTCTTGTAGTAACTCTATTAACTGTGGCTTTCGCGGCATGCATGGTTGTTTTTGCCTATCTATGGAAAAGGAAAATGGCCCGTAAGGAAGACAGGGGAAGAGTTCGGAGAATCCGAGGGATGTATGACAGCGAAAGAGAAGTGAAAGATTTGATAGACTTGGAAGAACTAGAAAGAGATAATGAAGGCATTGAGGTACCATATTATGATTTTGAAACTATACTGACAGCAACGGATAACTTTTCAGATGCTAACAGGCTTGGACGGGGAGGTTATGGCCCTGTTTATATGGGTATATTACCAGGGGAGCACTACATTGCAGTAAAGAGGCTTTCAAATGTTTCGTCACAAGGTTTGAAGGAATTCAAGAATGAGGTTGTTTTGATATCCAAACTACAGCATCGAAACCTTGTCAGACTTCGAGGCTATTGCATTACTAAAGATGATAAAATCTTAGTTTACGAATACTTGCCAAACAAGAGCTTGGACACATTTTTGTTCGATCCTACAAAGAGTCTGATTTTAGATTGGCATATGCGGCTTGACATAATTCTTGGAGTTGCTCGAGGAATACTATATCTTCACCAAGATTCTAGATTGAGAGTAATTCATAGAGACTTAAAAACAAGTAACATTCTTCTTGATGAGGAGATGAAACCAAAAATTTCAGACTTCGGTATGGCTAAAATATTTGGAAACAAAGAAATTGTGGCCAACACTGAAAGAATAGTTGGAACTTATGGTTATATGGCTCCAGAGTATGCATTAGATGGATCATTTTCTGTCAAATCAGATGTTTTTAGTTTTGGTGTGGTGGTGCTTGAAATTATCTGCGGAAAAAAGAACACAGGATACTTTCAATCCAAGCAAGCTTTCAGCCTCCTGGGTTATGCATGGAGGCTATGGGCGGAGAATAAGCTGTTGGATTTAATGGATCCATCTTTGAGTGAAAGCTGCGATGCAAATCAATTCATTAGGTGTGCGCAAGTTAGTTTGTTGTGTCTACAAGACGAACCAGAAGACAGGCCCACAATGTCGCAGGTATTGATAATGCTTGAAAGCGACACTGCAAGCCTCCCAAATCCAAAGCAACCTACCTTCTTTATGAAAAAAGACAGAGGCCTTTCTGGCTCTGCTTCTTCTTCCAGTAAACTTGAATCCATATTCTTTTTGCATGCATTGTTTTTCACCTGTATGCATTGCTCTGCTACGGATGTCATAAGCACTGACAATTTCTTAAGTGATAGGGAGGGGGACTCTCTTATTTCTGCCGGGGAAAGATTTGAACTAGGATTCTTCACCCCTAATGGAAGCTTTGGTGGTGGAAGATATGTGGGAATATGGTACCACAAGTCAAATCCACCCACAGTTGTGTGGGTTGCTAACCGAGAGAATCCACTTTCTGAAGCTGGGGGTGTTCTGGCCATAGCTGAGGATGGCAATCTCAGAGTTTTGGATGGAAGTGGGAGACATTACTGGGGTACAAATCTTGAAATGTCATCTTCAGCGCACAGGACAGCTAAGCTAATGGATAGTGGAAATCTTATTATAAGCGATGAAGAAAAAGGAAGTCACTCGGTGAAGATTGTATGGCAGAGTTTTGCAGCTCCAACAGATACATTTCTCCCCGGCATGAAAATGGATGAAAATTTGGTTCTACCTTCATGGAGAAGTTATGATGATCCGGCGCCCGGGAACTTCTCATTTCGCCAAGATCAAGGAGAGAACCAATATATCATATGGAAAAGATCTATCAGGTATTGGAAAAGCAGTACGACAGGTACATTTTTTGGGTCAGGTGAAATGTCTTCCGTAATATCTTACTTATTGTCGAATTTCACCCAGAGAATATCTCCAAATAACTCTGTTCCCTTTCTTACTTCATCTCTGTATGGCGACACAAGGCTGGTTATGACTTACTCTGGTCAGCTTCAGTATTTGAAGATGGATTCACAGAAAGTTTGGTCCTTGGTGTGGGCAGAACCACGAGATAGATGCAGCGTGTATAATGCTTGTGGTAACTTCGGCAGCTGCAATAGTAAGTATGATTTTATGTGCAAGTGTTTACCTGGGTTCACGCCTAACTCTCCCGAAGGCTGGGATTCCGGTGACTTCTCAGGTGGGTGCAGAAGGAAAACAAATGTGTGCAGAGAGAACGCTGAGAGTGACAGGTTTTTGAGTTTAAAAATGATGAAAGTAGGGAGCCCGGATGCTCAATTTAATGCCAAGAATGAAATGGAATGCAAGTTAGAATGCCTTAACAATTGCCAATGCTATGCATATTCATATCAAGATCCTAAAATCACAAGGGGGGCCGCTAGTGGTGACGCAGTGTGCTGGATTTGGACTGAAGACTTGAACAATCTTCAAGAGGAGTATGAGAATGGATGTGATCTCAATGTACGCGTAGCATATTTTGACATAGCATCCAATTGCAGGACCTGTAGGACTTGTGGTACAAACTTCATTCCATATCCACTTAGCACAGGACCACGTTGTGGCGATCCCATGTACTTAAGTTTTCACTGTAACTTCACTACAGGAGAACTTACCTTTGAAAGTCCTGGGGGCACTTATCAAGTGATAAGCATAACCCCTGAAACGCAAAAATTCATGATCCACAGCAGAGACATAAGTGATTGTGAGGGTCAAAGTTTGAGGGACAAGCTTCTGCGTCTAAACCAGTCATCTCCATTTCATCTAACTGGCAGGTGCAATGCTGACCCAAGCACCCTTAATCCAATTGCTCCTGCGAAACTTGGTGGGGAAATAGAAATGAGCTGGGATCCACCATTGGAGCCACTTTGTCGTTCTTTTTCAGACTGTAAGGACTGGCCAAATTCAATTTGCAATGCTTCCACAGATGGGCAAAAGAGATGTCTTTGCAAAACAAACTTTCTTTGGGATGGCTTGAGTTTAAATTGTACCATTGAAGGCAGCCGTCGCGGTAAAACAGGCAGGCGTTTGTCTGTTCCTTTGATTATTGCAGTCATTTTCACTATTGTGATTGTGCTAATTCTTCTATCAAGTACCGTCACCTGTGTTTACATTTGGAGGAGAAGGATGATCAAGACAAAAGAAATCAGGAGATATGTCAAGAAAAATTCAACGAGGAGCCTGTATGACAGTGAGAGATATGTCAAAGATTTGATTGAATCGGGTAGGTTCAAAGAAGATGACGGACATGCCATAGATATCCCAAATTTTCATTTGGAAAGCATACTTGATGCTACCAATAACTTTTCAAATGCAAACAAGCTTGGACAGGGAGGATTTGGTCCTGTCTACAAGGGAAAGTTTCCAGGAGGACAAGAGATGGCAGTAAAGAGACTTTCGAGTTGCTCTGGGCAAGGTTTAGAAGAGTTCAAAAATGAAGTTGTATTGATTGCCAAGCTTCAACATCGAAACTTGGTTAGGCTTCTCGGTTATTGTGTTGAAGGAGATGAAAAGATGTTAGTGTATGAATATATGCCAAATAGGAGTCTAGATTTTTTCATATTTGATAGGAAGTCATGTGTTTTATTAGATTGGGGCAAGCGTTTCAAGATTATTTTGGGAATTGCCCGAGGGCTTCTTTACCTTCATCAAGACTCAAGGCTAAGAATCATTCATAGAGACTTGAAGACAAGCAATATTCTACTCGATAAAGAGATGAACCCTAAAATCTCAGATTTTGGTTTAGCTAGGATCTTCGGAGGAAAAGAAACAGCAACAAACACGAACAGAGTAGTTGGAACTTATGGCTATATGTCTCCAGAATATGCACTAGATGGATTTTTTTCAGTCAAGTCTGATGTGTTTAGCTTTGGCGTGGTTGTACTCGAGATTCTTAGCGGAAAAAGGAACATGGGATTTTACCAGGCAGATCATGAATTGAGTCTTTTAGGCTATGCGTGGCATTTGTGGAAAGTAGAGAGAGCACCGGATTTTATGGATCAGACACTATCTCAGACATACAAGACAGATGAATATTTGAAGTGTGTAAATGTTGGACTGTTGTGCGTACAAGAAGATCCAAGTGACCGTCCCACCATGTCCAGTGTAGTTTTCATGCTTGGAAGTGATTCCAATACCCTTCCAACTCCCAAGCAGCCAGCCTTTGTTGCTAGAAGATGCCCTTCTAGCAGAGCCTCTACTACCAGTAAAGTGGAATCTTGTTCACATAATGAATTGACTGTCACTTTAGAAAACGGTAGGTAG 5988 0.4198 MKTVAVVLFSFTNWLLCFSQPYLALDTLKPGEKLTGNETLVSNGGKFELGFFSPRQDSSKYLGIWYHGLQPRTVVWVANRDHPAPDSTAFFQIADDGNLIVSDINGKSYWSSGLKASPSLNRTVKLMTSGNLVLFDNQLSINNLWQSFEHPTDTFLPFMKMNRNIKLTSWRRFDDPASGKFTFQLAQAGDNSYLILKDRVQLHWQTSDAMPSTISNLLTNFTLRQSPQLKNNFSRLPKLNNNVMNSTKLEAAYNLTRLVMNYTGKIEFQRYDITFGTGWSVGYGEPSGPCKIHDACGTFSSCNDQNLPPCKCLPGFHPKSLADNSLGERFNGCFRKTASCERKDIAFLNLTNIEIGSSDTPVDAESEEECQSKCLDKCPQCQAYSYNTKMLDRNSPSCLIWTRNLPTLKEHSPQSGISLSVRLLISDIAPNARTCEPCGTTVVPYPLSTGTNCGDPLYFELNCDNSTGEVNFTMPGLGPNRVAKINSDERKLIIQIQGPYICDDKENQRVQLDSPFSVTNWCFGQDKIEVTWLPPLEPLCHNSTDCNDWPRSTCNSDSKDGKRRCICNKNYYWNNSTLNCTPMSQESSGRKKPLTLILVVTLLTVAFAACMVVFAYLWKRKMARKEDRGRVRRIRGMYDSEREVKDLIDLEELERDNEGIEVPYYDFETILTATDNFSDANRLGRGGYGPVYMGILPGEHYIAVKRLSNVSSQGLKEFKNEVVLISKLQHRNLVRLRGYCITKDDKILVYEYLPNKSLDTFLFDPTKSLILDWHMRLDIILGVARGILYLHQDSRLRVIHRDLKTSNILLDEEMKPKISDFGMAKIFGNKEIVANTERIVGTYGYMAPEYALDGSFSVKSDVFSFGVVVLEIICGKKNTGYFQSKQAFSLLGYAWRLWAENKLLDLMDPSLSESCDANQFIRCAQVSLLCLQDEPEDRPTMSQVLIMLESDTASLPNPKQPTFFMKKDRGLSGSASSSSKLESIFFLHALFFTCMHCSATDVISTDNFLSDREGDSLISAGERFELGFFTPNGSFGGGRYVGIWYHKSNPPTVVWVANRENPLSEAGGVLAIAEDGNLRVLDGSGRHYWGTNLEMSSSAHRTAKLMDSGNLIISDEEKGSHSVKIVWQSFAAPTDTFLPGMKMDENLVLPSWRSYDDPAPGNFSFRQDQGENQYIIWKRSIRYWKSSTTGTFFGSGEMSSVISYLLSNFTQRISPNNSVPFLTSSLYGDTRLVMTYSGQLQYLKMDSQKVWSLVWAEPRDRCSVYNACGNFGSCNSKYDFMCKCLPGFTPNSPEGWDSGDFSGGCRRKTNVCRENAESDRFLSLKMMKVGSPDAQFNAKNEMECKLECLNNCQCYAYSYQDPKITRGAASGDAVCWIWTEDLNNLQEEYENGCDLNVRVAYFDIASNCRTCRTCGTNFIPYPLSTGPRCGDPMYLSFHCNFTTGELTFESPGGTYQVISITPETQKFMIHSRDISDCEGQSLRDKLLRLNQSSPFHLTGRCNADPSTLNPIAPAKLGGEIEMSWDPPLEPLCRSFSDCKDWPNSICNASTDGQKRCLCKTNFLWDGLSLNCTIEGSRRGKTGRRLSVPLIIAVIFTIVIVLILLSSTVTCVYIWRRRMIKTKEIRRYVKKNSTRSLYDSERYVKDLIESGRFKEDDGHAIDIPNFHLESILDATNNFSNANKLGQGGFGPVYKGKFPGGQEMAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLVYEYMPNRSLDFFIFDRKSCVLLDWGKRFKIILGIARGLLYLHQDSRLRIIHRDLKTSNILLDKEMNPKISDFGLARIFGGKETATNTNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEILSGKRNMGFYQADHELSLLGYAWHLWKVERAPDFMDQTLSQTYKTDEYLKCVNVGLLCVQEDPSDRPTMSSVVFMLGSDSNTLPTPKQPAFVARRCPSSRASTTSKVESCSHNELTVTLENGR 1995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4072g00049 1995 Gene3D - 22 149 IPR036426 -
Pral4072g00049 1995 Gene3D - 995 1132 IPR036426 -
Pral4072g00049 1995 FunFam Os08g0179000 protein 649 752 - -
Pral4072g00049 1995 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 995 1130 - -
Pral4072g00049 1995 SUPERFAMILY Protein kinase-like (PK-like) 1662 1975 IPR011009 -
Pral4072g00049 1995 Gene3D Transferase(Phosphotransferase) domain 1 753 960 - -
Pral4072g00049 1995 Gene3D Transferase(Phosphotransferase) domain 1 1753 1958 - -
Pral4072g00049 1995 FunFam Receptor-like serine/threonine-protein kinase SD1-8 20 148 - -
Pral4072g00049 1995 ProSiteProfiles Bulb-type lectin domain profile. 1002 1126 IPR001480 -
Pral4072g00049 1995 Gene3D Phosphorylase Kinase; domain 1 1643 1752 - -
Pral4072g00049 1995 Gene3D Phosphorylase Kinase; domain 1 642 752 - -
Pral4072g00049 1995 CDD STKc_IRAK 683 949 - -
Pral4072g00049 1995 ProSiteProfiles PAN/Apple domain profile. 1312 1393 IPR003609 -
Pral4072g00049 1995 ProSiteProfiles Protein kinase domain profile. 1677 1963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4072g00049 1995 Pfam S-locus glycoprotein domain 1190 1291 IPR000858 GO:0048544
Pral4072g00049 1995 Pfam S-locus glycoprotein domain 227 320 IPR000858 GO:0048544
Pral4072g00049 1995 CDD STKc_IRAK 1683 1948 - -
Pral4072g00049 1995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Pral4072g00049 1995 SMART blect_4 1008 1133 IPR001480 -
Pral4072g00049 1995 SMART blect_4 31 151 IPR001480 -
Pral4072g00049 1995 ProSiteProfiles EGF-like domain profile. 1258 1294 IPR000742 -
Pral4072g00049 1995 SUPERFAMILY Protein kinase-like (PK-like) 659 968 IPR011009 -
Pral4072g00049 1995 Pfam Protein tyrosine and serine/threonine kinase 1680 1946 IPR001245 GO:0004672|GO:0006468
Pral4072g00049 1995 Pfam Protein tyrosine and serine/threonine kinase 681 945 IPR001245 GO:0004672|GO:0006468
Pral4072g00049 1995 CDD B_lectin 34 151 IPR001480 -
Pral4072g00049 1995 SMART ntp_6 342 423 IPR003609 -
Pral4072g00049 1995 SMART ntp_6 1316 1399 IPR003609 -
Pral4072g00049 1995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1798 1810 IPR008271 GO:0004672|GO:0006468
Pral4072g00049 1995 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Pral4072g00049 1995 ProSiteProfiles PAN/Apple domain profile. 340 424 IPR003609 -
Pral4072g00049 1995 SUPERFAMILY alpha-D-mannose-specific plant lectins 1053 1158 IPR036426 -
Pral4072g00049 1995 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 172 IPR036426 -
Pral4072g00049 1995 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 1642 1752 - -
Pral4072g00049 1995 Pfam D-mannose binding lectin 1052 1147 IPR001480 -
Pral4072g00049 1995 Pfam D-mannose binding lectin 73 167 IPR001480 -
Pral4072g00049 1995 CDD B_lectin 1006 1133 IPR001480 -
Pral4072g00049 1995 ProSiteProfiles Protein kinase domain profile. 677 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4072g00049 1995 Pfam PAN-like domain 340 405 IPR003609 -
Pral4072g00049 1995 Pfam PAN-like domain 1315 1384 IPR003609 -
Pral4072g00049 1995 CDD PAN_AP_plant 1312 1400 - -
Pral4072g00049 1995 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 753 956 - -
Pral4072g00049 1995 SMART serkin_6 677 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4072g00049 1995 SMART serkin_6 1677 1947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4072g00049 1995 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1753 1956 - -
Pral4072g00049 1995 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1112 1974 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4072g00049 Pral-Chr4072 302925 317272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4072g00049 596 963 Receptor kinase-like Gene Family AT4G23230 49.457 1.69e-114 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4072g00049 PK_Tyr_Ser-Thr 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4072g00049 - - mnt:21392085 2216.81