Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4072g00039 ATGAAAACTGAGTTAAAAGGAAGCACTACTTCCATTTCTCTCCAATACCCAACTCTCTTCAACGCACCCCACAGTAACCTTGGTCTCTCAGGAGAACTCAACGGGTGCCTAGGAAGCCTCGATGGAGCTTGTATAGAGAAGCTCTTACTCCATTGTGCCAGTGCTTTGGAGAGTAACGATGTAACTTTAGCTCAACAAGTCATGTGGGTGCTTAATAATGTTGCTTCTCCAGTTGGTGACACCAACCAAAGGCTCACCTCCTGGTTCCTTAGAGCCTTAATCTCTAGGGCCTCACGAGTCTGCCCGATGAACTTCAACGGAAGAAGCAGCACCATCCAGAGAAGGTTGATGTCCGTGACAGAGCTTGCAGGGTACGTTGATCTTATCCCTTGGCATCGGTTTGGCTTTTGTGCTTCCAATAGTGCTATTTTTAAAGCAATTCATGGGTTCCAAAGAGTGCACATACTAGATTTTAGCATTACCCATTGTATGCAATGGCCTACTCTTATAGATGCTTTGGCCAAAAGGCCAGAAGGCCCTCCTGAGGTTAAAATCACAGTGCCTTCTTGGCGGCCACCTGTCCCTCCTTTGATCAACATTTCAACAGAAGAAGTTGGGCTGCGTTTGGGGAATTTCGCTAAGTTCAGGGATGTCCCTTTTGAATTCAATGTGATTGGAAGGAGCACATCTTCTGAGTTAAGCAATATTAATGATTCATCCAGCTTTTCTTTTGAGTCAATGTTAAGTCACTTGAATCCTACCACGTTAAATCTTAGGGAAGACGAAGCTTTGGTTATAAATTGTCAAAATTGGCTACGTTACTTGTCTGATGAAAGAAAGGGGAGTTTCCAAGACGCATCCCCTAGGGACACTTTCATAAATCTAATTAAAAATCTTAACCCTAGAATAGTACTATTGGTTGACGAGGATTGTGATCTCAATGTACCAAGTCTCGCGTCAAGAATCACCACTTGTTTCAACTATTTGTGGATACCCTTTGATGCTTTGGAGACCTTTTTGCCTAAAGATAGCAACCAGAGGGTAGAGTATGAATCTGACATAGGCCAGAAAATTGATAACGTCGTTAGCTTCGAAGGGGTTCAGAGAATAGAGAGATTAGAGAGCGGCGCGAACATGTCGCAAAGGATGAAAAATGGAGGTTTCTTCAACGTTCAATTCTGTGAAGAAACTATGAGAGAAGTCAAGGCTTTGCTTGATGAGCATGCAAGTGGATGGGGTATGAAGATAGAAGAAGATATGTTAGTCCTCACATGGAAAGGCCACAACTCTGTCTTCGCCACAGCTTGGGTCCCCAGTGAGCTAAACGATCATATGGGTGTGGGCTGA 1347 0.4388 MKTELKGSTTSISLQYPTLFNAPHSNLGLSGELNGCLGSLDGACIEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDTNQRLTSWFLRALISRASRVCPMNFNGRSSTIQRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIHGFQRVHILDFSITHCMQWPTLIDALAKRPEGPPEVKITVPSWRPPVPPLINISTEEVGLRLGNFAKFRDVPFEFNVIGRSTSSELSNINDSSSFSFESMLSHLNPTTLNLREDEALVINCQNWLRYLSDERKGSFQDASPRDTFINLIKNLNPRIVLLVDEDCDLNVPSLASRITTCFNYLWIPFDALETFLPKDSNQRVEYESDIGQKIDNVVSFEGVQRIERLESGANMSQRMKNGGFFNVQFCEETMREVKALLDEHASGWGMKIEEDMLVLTWKGHNSVFATAWVPSELNDHMGVG 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4072g00039 448 ProSiteProfiles GRAS family profile. 36 437 IPR005202 -
Pral4072g00039 448 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 426 IPR005202 -
Pral4072g00039 448 Pfam GRAS domain family 46 436 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4072g00039 Pral-Chr4072 208420 210305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4072g00039 17 438 GRAS Transcription Factor Family AT3G49950 46.528 3.13e-123 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral4072g00039 GRAS 9e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4072g00039 - - qsa:O6P43_000622 706.827