Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4072g00023 ATGGTTTATCATAATCAGAAGTCCGTTGGCGAGAACCTACCAAGGGCAAAGTTCATGTCTGAATTCGATGAACAGACTCCAACTGCTTATGATCCCTTTGCTGATGCAAATGCTGAGGACTCCGGTGCTGGGACAAAGGAGTATATTCATGTGCGTGTGCAGCAACGCAATGGAAGGAAAAGCCTGACAACTGTTCAAGGGCTGAAGAAGGAGTACAGCTATAGCAAGATACTGAAGGACCTGAAGAAAGAGTTCTGCTGTAATGGTACTGTTGTCCAAGACCCCGAGCTGGGCCAGGTCATACAACTTCAGGGAGATCAAAGAAAGAACGCTTCCACATTCCTTGTGCAGGCTGGAATAGCAAAGAAGGAGCAGATCAAGATTCATGGTTTCTAG 396 0.4646 MVYHNQKSVGENLPRAKFMSEFDEQTPTAYDPFADANAEDSGAGTKEYIHVRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNASTFLVQAGIAKKEQIKIHGF 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4072g00023 131 NCBIfam translation initiation factor SUI1 25 131 IPR005874 GO:0003743
Pral4072g00023 131 SUPERFAMILY eIF1-like 19 131 IPR036877 GO:0003743|GO:0006413
Pral4072g00023 131 ProSiteProfiles Translation initiation factor SUI1 family profile. 49 119 IPR001950 GO:0003743|GO:0006413
Pral4072g00023 131 Pfam Translation initiation factor SUI1 46 120 IPR001950 GO:0003743|GO:0006413
Pral4072g00023 131 Gene3D - 11 131 - -
Pral4072g00023 131 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 26 131 - -
Pral4072g00023 131 FunFam Eukaryotic translation initiation factor SUI1 20 131 - -
Pral4072g00023 131 CDD eIF1_SUI1 47 130 IPR005874 GO:0003743
Pral4072g00023 131 PIRSF Transl_init_SUI1_Euk 18 131 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4072g00023 Pral-Chr4072 115930 118281 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4072g00023 19 131 Eukaryotic Initiation Factors Gene Family AT4G27130 88.496 1.48e-74 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4072g00023 K03113 - pop:7454418 214.542