Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4072g00020 ATGGCTGACATGGATCGCTCTTCTGATGATGTTTCTGCAGATTCTACAGCAGAGCAAACCTGTGAAGCTTCAAAGCTTGAGTTCTCTGAAGATGAGGAAACCCTTATAACCAGGATGTTCAATCTGGTTGGTCAGAGGTGGTCTTTGATTGCTGGAAGAATCCCTGGAAGAACAGCAGAAGAAATAGAGAAGTACTGGACTTCAAGATGCTCAACCAGTGAATAA 225 0.4356 MADMDRSSDDVSADSTAEQTCEASKLEFSEDEETLITRMFNLVGQRWSLIAGRIPGRTAEEIEKYWTSRCSTSE 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4072g00020 74 MobiDBLite consensus disorder prediction 1 26 - -
Pral4072g00020 74 Gene3D - 27 74 - -
Pral4072g00020 74 FunFam MYB-like transcription factor 27 69 - -
Pral4072g00020 74 SUPERFAMILY Homeodomain-like 27 69 IPR009057 -
Pral4072g00020 74 SMART sant 24 72 IPR001005 -
Pral4072g00020 74 Pfam Myb-like DNA-binding domain 27 67 IPR001005 -
Pral4072g00020 74 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 25 70 - -
Pral4072g00020 74 CDD SANT 27 66 IPR001005 -
Pral4072g00020 74 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Pral4072g00020 74 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 74 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4072g00020 Pral-Chr4072 113221 114723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4072g00020 28 71 MYB Transcription Factor Family AT5G14750 52.273 9.98e-14 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4072g00020 Myb_DNA-binding 1.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4072g00020 - - dzi:111287942 121.324