Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4071g00004 ATGCCGAGGATGATGCACAGTGAAGACGACTTTAGAGACGAGGTTGAGGACGAGGCGGTGGAAGCGACGAACGCAGAGGCATCGAGAGACGGCGAGGCGAAGCAGAGCATGAAGAAGGGGCCGTGGACGGCGGCGGAGGATGCCATTTTGATGGAGTACGTGAACAAGTACGGCGAAGGGAATTGGAATTCCGTGCAGAAGAACTGTGGGTTGACGAGGTGTGGCAAAAGTTGCAGGCTCAGATGGGCCAACCACCTCAGGCCTAATCTCAAGAAAGGTGCTTTCTCTCAGGAAGAAGAACAGCTCATCGTCGAGCTTCACGCCAAGCTCGGAAACAAATGGGCTCGCATGGCTTCCCTGTTACCTGGGAGAACTGATAATGAGATAAAGAATTTCTGGAACACGAGAATGAAAAGACGCCAGAGAGCTGGGTTGCCTCTGTATCCTCCAGAACTCCAAGAAGAAGCTTCTCTGCATCATCTTCACCAAAATCCGCAATACCATGCACCACCACCTCACCATTCTTCTTCTTTCTCATTTTCTTCTCTCCTATCTTCTTCCTCCAACAAACGCCATAAGCTCAGTCGCCAGCTAAACAACCTTGGTTATGATATAACTTACGACAGAAGCAATCAACACCATCAAAACATCGGCCTGCCATTACTTTCCTCTGTTTCTCCAAATGGGTTTAGTTATTCCGGTGGTACGATGACAGAGATCTCTTCGACCCGATCGGAAACGCCTCCTTCTTCCTACAGTACTGGTGGGGTTCATGGCTTGATGGGAGGTTCCACCATTAGTCCTGGACTTGACTACCATGAAGTTGCACCATTGTCATCATCAACTGAAGGAAACAGCGGGCTTTTGGATGCTTTATTGATGGAGTCTCAAGCCCTTTATGATTCTGCTGCAGGAAGGAAATTATCCTTGAAGAGGAAACGAATTGCAGACGAGGAAGACAGAGACACTGAACAATTGGATTCCGATGGGAAGGATAATAGTGGTGGACTCCAGAGGGATGATTTAAGCTCCTCTCAATTATCAACAGAGAAGAAGGCATCATCAGTTAGGGATAACGATCCATTGGAGGAGATGAGTTCCATGGACGATGACTTGTTTAGCCTGTTGAACAATTTTCCGTCAGAAATGCCAGTGCCTGAGTGGTACCGAAGAGGAGAAAGACAAGCACTGGGAGTTGAAAATCAACAAGAAGCTTCCCTGGGACAACCTAATCAGCAAGTTGCTTGGACCCTCGGAACCTGTTGGTCGAACGACCTGCATAGTATATGCTAA 1293 0.4818 MPRMMHSEDDFRDEVEDEAVEATNAEASRDGEAKQSMKKGPWTAAEDAILMEYVNKYGEGNWNSVQKNCGLTRCGKSCRLRWANHLRPNLKKGAFSQEEEQLIVELHAKLGNKWARMASLLPGRTDNEIKNFWNTRMKRRQRAGLPLYPPELQEEASLHHLHQNPQYHAPPPHHSSSFSFSSLLSSSSNKRHKLSRQLNNLGYDITYDRSNQHHQNIGLPLLSSVSPNGFSYSGGTMTEISSTRSETPPSSYSTGGVHGLMGGSTISPGLDYHEVAPLSSSTEGNSGLLDALLMESQALYDSAAGRKLSLKRKRIADEEDRDTEQLDSDGKDNSGGLQRDDLSSSQLSTEKKASSVRDNDPLEEMSSMDDDLFSLLNNFPSEMPVPEWYRRGERQALGVENQQEASLGQPNQQVAWTLGTCWSNDLHSIC 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4071g00004 430 FunFam Transcription factor GAMYB 94 140 - -
Pral4071g00004 430 SMART sant 91 139 IPR001005 -
Pral4071g00004 430 SMART sant 38 88 IPR001005 -
Pral4071g00004 430 MobiDBLite consensus disorder prediction 337 352 - -
Pral4071g00004 430 Gene3D - 38 91 - -
Pral4071g00004 430 FunFam MYB-related transcription factor 38 91 - -
Pral4071g00004 430 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 18 401 - -
Pral4071g00004 430 ProSiteProfiles Myb-like domain profile. 87 137 IPR001005 -
Pral4071g00004 430 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 141 IPR017930 -
Pral4071g00004 430 MobiDBLite consensus disorder prediction 22 36 - -
Pral4071g00004 430 ProSiteProfiles Myb-like domain profile. 34 86 IPR001005 -
Pral4071g00004 430 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 86 IPR017930 -
Pral4071g00004 430 SUPERFAMILY Homeodomain-like 36 133 IPR009057 -
Pral4071g00004 430 Gene3D - 94 168 - -
Pral4071g00004 430 Pfam Myb-like DNA-binding domain 42 102 - -
Pral4071g00004 430 MobiDBLite consensus disorder prediction 316 366 - -
Pral4071g00004 430 MobiDBLite consensus disorder prediction 163 182 - -
Pral4071g00004 430 MobiDBLite consensus disorder prediction 316 336 - -
Pral4071g00004 430 CDD SANT 41 86 IPR001005 -
Pral4071g00004 430 CDD SANT 94 135 IPR001005 -
Pral4071g00004 430 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4071g00004 Pral-Chr4071 29610 31528 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4071g00004 30 156 MYB Transcription Factor Family AT5G06100 80.315 2.37e-69 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4071g00004 Myb_DNA-bind_6 7.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4071g00004 K09422 - gmx:100784779 392.889