Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4069g00009 ATGGATTGGAGCAGAGGCCATATCTTAGGCTGCGGCTCCTCCGCCACCGTCTCTCTCGCCTCCTCCTCACGCTCTGACCTCGTCTTCGCCGTCAAGTCATCGGGGCTCTCTCGCTCTCAGTTCTTACAGAGAGAACAGAGTATCCTGTCTACTGTGTCCTCTCCTTATATTGTTGCCTATAAAGGGTGTGATGTTAGTAGAGAGAATAACCAGCTCTTTTACAATCTCTTCATGGAGTACATGCCCTTCGGTACTGTTCTTCAGGCGGTTCAACGGCACGGTGGCCGCCTCGACTTAGGGTTGGTAGGGTTCTATACGTGGCAAATTTTGCAGGGGCTGGAGTATTTACATTCCAACAAGTTGGCACATTGTGATATTAAGAGCACCAACATATTGATCGGTGAAGATGGAGCGAAGATTTCGGATTTTGGGTGTGCCAAGCGGGTTGATGACACGGCAGCGCCAATCAGCGGGACGCCGATGTTCATGGCGCCGGAGGTGGCGCGTGGGGATGAACAGGGGTGTGCTGGTGATATTTGGGCACTTGGGTGCACAGTGATTGAAATGGCTACTGGGGATTCGCCGTGGCCGAACATGTCGGACCCTTTCTCGGTTCTTCACCGGATAGCATATGCCGGCGAGACGCCCGAGATTCCAGGGTCTCTACCGGAGGAAGCAAAGGATTTCTTAGACAAGTGCTTGAGGAGGAATCCGACAGAGAGATGGACGGCTACTCAACTGTTAAAACACCCATTCGTCACGGAATTCAATTCGAAATCCATCGAGAAGGAAATTGAAAAACTCAATTCGAGTTCACCCACATGCGTACTTGAGCAGGGGTTTTGGAATTCCATGGAAGAACCGGAAACTCACGGAAATTTGATCCGTACGAGGTTCGAAAATTCTGCTTCTGATAGAATCAGAAGGCTAGCTGAGTTCTCAGGGGAACCCAGATTGACGAGTGATGATAACTGGGTCACAATCAGAGGAATCGATGAAACATCAGCTTCAACCAGCGACGATGACTTGGAAGAGTCGGTGAAAAGCAACGTTAGAAGTAGTAGAATTAGTGGGTGTTTTACCGGAAATTACGAATTTAGTGAAATTAGTGATATGATTAGTACTCATTACAATTTTGAGAGAGGCACTGTTAATAGGGTGATACAAGCTTCCATGTCAGCTTATTCGTGA 1191 0.4853 MDWSRGHILGCGSSATVSLASSSRSDLVFAVKSSGLSRSQFLQREQSILSTVSSPYIVAYKGCDVSRENNQLFYNLFMEYMPFGTVLQAVQRHGGRLDLGLVGFYTWQILQGLEYLHSNKLAHCDIKSTNILIGEDGAKISDFGCAKRVDDTAAPISGTPMFMAPEVARGDEQGCAGDIWALGCTVIEMATGDSPWPNMSDPFSVLHRIAYAGETPEIPGSLPEEAKDFLDKCLRRNPTERWTATQLLKHPFVTEFNSKSIEKEIEKLNSSSPTCVLEQGFWNSMEEPETHGNLIRTRFENSASDRIRRLAEFSGEPRLTSDDNWVTIRGIDETSASTSDDDLEESVKSNVRSSRISGCFTGNYEFSEISDMISTHYNFERGTVNRVIQASMSAYS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4069g00009 396 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 316 - -
Pral4069g00009 396 ProSiteProfiles Protein kinase domain profile. 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4069g00009 396 SUPERFAMILY Protein kinase-like (PK-like) 2 263 IPR011009 -
Pral4069g00009 396 Gene3D Transferase(Phosphotransferase) domain 1 88 279 - -
Pral4069g00009 396 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Pral4069g00009 396 SMART serkin_6 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4069g00009 396 CDD STKc_MAPKKK 2 253 - -
Pral4069g00009 396 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Pral4069g00009 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Pral4069g00009 396 Pfam Protein kinase domain 5 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4069g00009 396 FunFam Mitogen-activated protein kinase kinase kinase 17 2 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4069g00009 Pral-Chr4069 63006 64291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4069g00009 1 329 MAP Kinase Kinase Kinase AT2G32510 50.287 2.81e-109 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral4069g00009 Pkinase 5.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4069g00009 K20716 - cave:132182830 437.187