Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4069g00007 ATGGACTTCTTCAGTAACAGCAATCTCAAGCCTTCATCTTCCAACGATGATTTCTCTACCCCTCCCCATCCTCTTGAATTCAAAGTAAACACTGGTCTCAGTCTCTTGACCACTAACACCGACCAATCCTTGGTGGACGATGAATTTTCCATATATGCTAATTGTAAAGTGAAACGAGCCAATATTGAGACTGATGAGGTTGCTGTTCTTCGCGCTGAGTTAGACCAGATGATGCGAGAGAATAGTAAGCTGAGAGACATGCTAAATGAGGTCAATACTAATTACAATGCCTTGAAGATGCATACAGACTTCATCGAGTCTCGCAAGGGCAGGGAGGACGCTGAGAAACCAGAAAACCCAGTGCCTGATGCGAGTTTAGAAGAAAAGAAACAAACAGATAGTAACAGAGGAACATTAGTGTCAAGGCAATTTATAGATCTTGGATTAGCTTCAATCAATGATGGTGAGGCTAATAGTGATGAACATTCGCTTTCTTCGTCCATGAGGAGAAGCAATGACAGATCAAGATCACCCTTGGAAGTGGAGTGTAGGGCCAAGATTGGTTCTGATGAGAAGGAATTCAACAAAGGAACTGAAACTGAACAAGAAGCTGACAAAATTAATCAGAAGTATAGTCCTCCCAGAAACGTTGATGATCAGCTGGAAGCCACCATGAAGAAGGCAAGAGTTTCAGTTAGAGCTCGATCAGAAGCACCCATGATTACTGATGGATGTCAATGGAGAAAATATGGGCAGAAGAAGGCCAAAGGGAATCCATGCCCTCGAGCTTATTATCGTTGCACCATGGCTTCAGGTTGTCCTGTCAGGAAACAGGTGCAAAGGTGTGCAGAGGATCGAACAATTTTGGTAACAACATATGAAGGAAATCATAACCATGCACTGCCTCCAGCAGCAATGGCGATGGCACAAACAACAGCAGCAGCGACAAGGATGTTGCTTTCAGGATCAATGTCAAGTAGTGATGGTTTAATGAATGGAAGCTTCTTGACAAGGACGACATTGTTTCCTTGTTCTTCAAGTAACATGGCAACTCTCTCGGCCACAGCTCCATTTCCAACGGTTACATTGGATCTAACCATTCCTCCAACAACACAACCTTCTACCCAATTTCAAATGCCTTTCTCAAATAATTCCCCTAATGGTTTTACCCAGGTGTTGGCTCAAGCACTTTACAACAACAATCAATCAAATTTTTCAGGACTTCAAATGAATAATAAAGACCCCTTGCAATTGAGTGCAGCTATAGCAGCTGACCCTAACCTCACAGCAGCTTTAACGGCGGCTATTACTTCTATCATGGGTTCTACCCTACCAAAGAATGTTAACAGTGATAATAATGGCAATGTTACTAGTGGAAATAACAGCGGTTTAAATTTTTTTGGAAGCTAG 1410 0.4248 MDFFSNSNLKPSSSNDDFSTPPHPLEFKVNTGLSLLTTNTDQSLVDDEFSIYANCKVKRANIETDEVAVLRAELDQMMRENSKLRDMLNEVNTNYNALKMHTDFIESRKGREDAEKPENPVPDASLEEKKQTDSNRGTLVSRQFIDLGLASINDGEANSDEHSLSSSMRRSNDRSRSPLEVECRAKIGSDEKEFNKGTETEQEADKINQKYSPPRNVDDQLEATMKKARVSVRARSEAPMITDGCQWRKYGQKKAKGNPCPRAYYRCTMASGCPVRKQVQRCAEDRTILVTTYEGNHNHALPPAAMAMAQTTAAATRMLLSGSMSSSDGLMNGSFLTRTTLFPCSSSNMATLSATAPFPTVTLDLTIPPTTQPSTQFQMPFSNNSPNGFTQVLAQALYNNNQSNFSGLQMNNKDPLQLSAAIAADPNLTAALTAAITSIMGSTLPKNVNSDNNGNVTSGNNSGLNFFGS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4069g00007 469 MobiDBLite consensus disorder prediction 109 135 - -
Pral4069g00007 469 MobiDBLite consensus disorder prediction 1 20 - -
Pral4069g00007 469 MobiDBLite consensus disorder prediction 166 180 - -
Pral4069g00007 469 Coils Coil 60 94 - -
Pral4069g00007 469 Pfam WRKY DNA -binding domain 243 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4069g00007 469 FunFam probable WRKY transcription factor 31 226 303 - -
Pral4069g00007 469 SUPERFAMILY WRKY DNA-binding domain 234 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4069g00007 469 Gene3D WRKY domain 226 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4069g00007 469 MobiDBLite consensus disorder prediction 153 180 - -
Pral4069g00007 469 ProSiteProfiles WRKY domain profile. 236 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4069g00007 469 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 45 453 IPR044810 GO:0003700
Pral4069g00007 469 MobiDBLite consensus disorder prediction 192 208 - -
Pral4069g00007 469 MobiDBLite consensus disorder prediction 109 138 - -
Pral4069g00007 469 MobiDBLite consensus disorder prediction 1 23 - -
Pral4069g00007 469 SMART WRKY_cls 241 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4069g00007 469 MobiDBLite consensus disorder prediction 192 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4069g00007 Pral-Chr4069 47170 49721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4069g00007 1 443 WRKY Transcription Factor Family AT1G62300 45.791 5.36e-104 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4069g00007 WRKY 4.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4069g00007 - - pcin:129313060 621.313