Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4068g00036 ATGTCAATGGAAATGATGGCAGCCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGGTTAGTGTTCCATGCAACAGCTTACTGACCATAGTGACGGTTAGATGCGGGCATTGTGCCAATTTGCTCTCAGTTAACGTGGGTGCTTCACTTCAAGCGTTTCCTCCTCACCAGAGTCACCCTCAGAAACAGCATCTGACTTTTGAGGAACCAAGTAACAAAGATCCGGGATCATCCTCAAAATGCAGCAAGTTAGCCCCGTTTGAATCGGTAGAGCATGAGCAACTTAGGATTCCTCCCATTCGCCCTCCTGAGAAGAGACAACGTGTTCCTTCTGCTTATAATCGGTTCATTAAGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCTGATATCAGCCACAGGGAGGCTTTTAGCACAGCAGCAAAAAATTGGGCACATTTCCCTCACATTCACTTTGGACTAAAGGTGGATGGAAACAAGCAAAGCCAAATTGGACCAGGGGGAGGGAACTGA 528 0.464 MSMEMMAAERVCYVHCNFCNTILAVSVPCNSLLTIVTVRCGHCANLLSVNVGASLQAFPPHQSHPQKQHLTFEEPSNKDPGSSSKCSKLAPFESVEHEQLRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKVDGNKQSQIGPGGGN 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4068g00036 175 CDD HMG-box_SF 113 149 - -
Pral4068g00036 175 Pfam YABBY protein 7 159 IPR006780 GO:0007275
Pral4068g00036 175 MobiDBLite consensus disorder prediction 60 87 - -
Pral4068g00036 175 Gene3D High mobility group box domain 99 154 IPR036910 -
Pral4068g00036 175 PANTHER PROTEIN YABBY 6-RELATED 1 167 IPR006780 GO:0007275
Pral4068g00036 175 FunFam Axial regulator YABBY 104 170 - -
Pral4068g00036 175 SUPERFAMILY HMG-box 104 152 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4068g00036 Pral-Chr4068 251483 257770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4068g00036 1 168 C2C2-YABBY Transcription Factor Family AT1G08465 66.860 5.46e-75 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pral4068g00036 YABBY 4.7e-71 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4068g00036 K25796 - gmx:100500091 298.901