Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4068g00027 ATGGGCGTCTCAGGGAAGTGGATTAAAGCTTTGGTTGGTCTAAAGAAATCTGAAAAGGCAGAGTCTTCAGATAAGGATGTAAATAATCAAGCCATCTCTAGGACTGGAAAAATACGGCACCGAAGGAAACGATCCATTGACATGGACAATGAAAAACTCCAAAATGAGTTTAACCATGACGCTGCTCCTTTTGGGGATGCCAATATCCACTCAGTCACTGATGTCCAAGATTCACCTTCCACTTCACAACAAGTACAGGGTGCCGCATTTGGGCATCAAATTATGAGGGAGGAATGGGCAGCAACACGCATTCAAACAGCATTCCGAGGATTTTTGGCCCGAAGAGCACTACGGGCTTTGAAAGGATTGGTACGGCTTCAGGCCCTTGTAAGAGGTCATGCTGTGAGGAAACAAGCTGCCATAACTCTCCGTTGTATGCAAGCTTTGGTGAGAGTCCAGGCACGTGTTCGAGCAAGGCGTGTGCGCATAGCCTTAGAAAGTCAATCAGCACAACAGAAACTTCAGCAACAACTTGCAAATGAAGCTCGTGTTCGAGAAATAGAAGAAGGTTGGTGTGACAGTATGGGATCTGTTGAAGAAATTCAAGCCAAATTATTGAAGAGACAGGAGGCTGCAGCTAAACGAGAGAGAGCAATGGCATACGCTCTGGCACATCAGTGGCAGGCGGCATCAAGACAGCAGGCTGCTTCTTCTGGATTTGAACCAGATAAGAGTGGCTGGGGTTGGAATTGGCTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAATCGTTTTCTTGACATTAATACAAGGGATGGAGTAATGGTGTGTGAAAATGGAGCAGTGGAGGGTAAAAATGAAATCAGATCTCAATTAAGATCTGCTAGCAAGAAATCGGTTCTGCCAAGTATTAGTCCAAACCTTACCAGTCAGAAAACCGGGCCATCATTATCTGATGGTTGTGACTCTTCACCTAGCAAGTCTGCTGGTTTGCTGGAGGCATCAAAACCGCAGATTAAGACGAAATCTAATGCAAATGTTGCAACTGAAGAAGCCAACTCAAAACCTGGGCTTGGTTCGAGATCTCATAGTAATCCGAAGGAGCGAACCACACAAGCTGATAAACAGGCAAAAAAAAGATTATCTCTGCCTAACAATGGGGGAGGCGCCGGAGCTCAAACAGCCAAAAATCCTGCCAGAACTAATGTGAAGGGGGCAATCAGCACTCAAAAAGCTGTTCGTGACAAGCCTAAGCTCAGTGGAAGAGGCGATGTGAATTCAACAAAAACTGTTCCTCAACACGCAGAAATGTAA 1314 0.4581 MGVSGKWIKALVGLKKSEKAESSDKDVNNQAISRTGKIRHRRKRSIDMDNEKLQNEFNHDAAPFGDANIHSVTDVQDSPSTSQQVQGAAFGHQIMREEWAATRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRIALESQSAQQKLQQQLANEARVREIEEGWCDSMGSVEEIQAKLLKRQEAAAKRERAMAYALAHQWQAASRQQAASSGFEPDKSGWGWNWLERWMAVRPWENRFLDINTRDGVMVCENGAVEGKNEIRSQLRSASKKSVLPSISPNLTSQKTGPSLSDGCDSSPSKSAGLLEASKPQIKTKSNANVATEEANSKPGLGSRSHSNPKERTTQADKQAKKRLSLPNNGGGAGAQTAKNPARTNVKGAISTQKAVRDKPKLSGRGDVNSTKTVPQHAEM 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4068g00027 437 ProSiteProfiles IQ motif profile. 121 148 IPR000048 GO:0005515
Pral4068g00027 437 Pfam IQ calmodulin-binding motif 99 118 IPR000048 GO:0005515
Pral4068g00027 437 MobiDBLite consensus disorder prediction 18 42 - -
Pral4068g00027 437 MobiDBLite consensus disorder prediction 423 437 - -
Pral4068g00027 437 MobiDBLite consensus disorder prediction 387 408 - -
Pral4068g00027 437 PANTHER IQ-DOMAIN 5-RELATED 1 389 - -
Pral4068g00027 437 MobiDBLite consensus disorder prediction 290 437 - -
Pral4068g00027 437 FunFam IQ-domain 11 96 147 - -
Pral4068g00027 437 ProSiteProfiles IQ motif profile. 97 125 IPR000048 GO:0005515
Pral4068g00027 437 SMART iq_5 119 140 IPR000048 GO:0005515
Pral4068g00027 437 SMART iq_5 96 118 IPR000048 GO:0005515
Pral4068g00027 437 Gene3D - 97 139 - -
Pral4068g00027 437 MobiDBLite consensus disorder prediction 293 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4068g00027 Pral-Chr4068 197796 212505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4068g00027 1 416 IQD Protein Family AT3G22190 59.048 1.55e-132 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4068g00027 - - qsa:O6P43_000537 539.265