Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4068g00026 ATGGGCGTCTCAGGGAAGTGGATTAAAGCTTTGGTTGGTCTAAAGAAATCTGAAAAGGCAGAGTCTTCAGATAAGGATGTAAATAGGACTGGAAAAATACGGCACCGAAGGAAACGATCCATTGACATGGACAATGAAAAACTCCAAAATGAGTTTAACCATGACGCTGCTCCTTTTGGGGATGCCAATATCCACTCAGTCACTGATGTCCAAGATTCACCTTCCACTTCACAACAAGTACAGGGTGCCGCATTTGGGCATCAAATTATGAGGGAGGAATGGGCAGCAACACGCATTCAAACAGCATTCCGAGGATTTTTGGCCCGAAGAGCACTACGGGCTTTGAAAGGATTGGTACGGCTTCAGGCCCTTGTAAGAGGTCATGCTGTGAGGAAACAAGCTGCCATAACTCTCCGTTGTATGCAAGCTTTGGTGAGAGTCCAGGCACGTGTTCGAGCAAGGCGTGTGCGCATAGCCTTAGAAAGTCAATCAGCACAACAGAAACTTCAGCAACAACTTGCAAATGAAGCTCGTGTTCGAGAAATAGAAGAAGGTTGGTGTGACAGTATGGGATCTGTTGAAGAAATTCAAGCCAAATTATTGAAGAGACAGGAGGCTGCAGCTAAACGAGAGAGAGCAATGGCATACGCTCTGGCACATCAGTGGCAGGCGGCATCAAGACAGCAGGCTGCTTCTTCTGGATTTGAACCAGATAAGAGTGGCTGGGGTTGGAATTGGCTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAATCGTTTTCTTGACATTAATACAAGGGATGGAGTAATGGTGTGTGAAAATGGAGCAGTGGAGGGTAAAAATGAAATCAGATCTCAATTAAGATCTGCTAGCAAGAAATCGGTTCTGCCAAGTATTAGTCCAAACCTTACCAGTCAGAAAACCGGGCCATCATTATCTGATGGTTGTGACTCTTCACCTAGCAAGTCTGCTGGTTTGCTGGAGGCATCAAAACCGCAGATTAAGACGAAATCTAATGCAAATGTTGCAACTGAAGAAGCCAACTCAAAACCTGGGCTTGGTTCGAGATCTCATAGTAATCCGAAGGAGCGAACCACACAAGCTGATAAACAGGCAAAAAAAAGATTATCTCTGCCTAACAATGCAGGGGGAGGCGCCGGAGCTCAAACAGCCAAAAATCCTGCCAGAACTAATGTGAAGGGGGCAATCAGCACTCAAAAAGCTGTTCGTGACAAGCCTAAGCTCAGTGGAAGAGGCGATGTGAATTCAACAAAAACTGTTCCTCAACACGCAGAAATGTAA 1302 0.4593 MGVSGKWIKALVGLKKSEKAESSDKDVNRTGKIRHRRKRSIDMDNEKLQNEFNHDAAPFGDANIHSVTDVQDSPSTSQQVQGAAFGHQIMREEWAATRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRIALESQSAQQKLQQQLANEARVREIEEGWCDSMGSVEEIQAKLLKRQEAAAKRERAMAYALAHQWQAASRQQAASSGFEPDKSGWGWNWLERWMAVRPWENRFLDINTRDGVMVCENGAVEGKNEIRSQLRSASKKSVLPSISPNLTSQKTGPSLSDGCDSSPSKSAGLLEASKPQIKTKSNANVATEEANSKPGLGSRSHSNPKERTTQADKQAKKRLSLPNNAGGGAGAQTAKNPARTNVKGAISTQKAVRDKPKLSGRGDVNSTKTVPQHAEM 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4068g00026 433 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Pral4068g00026 433 SMART iq_5 91 113 IPR000048 GO:0005515
Pral4068g00026 433 SMART iq_5 114 135 IPR000048 GO:0005515
Pral4068g00026 433 MobiDBLite consensus disorder prediction 419 433 - -
Pral4068g00026 433 FunFam IQ-domain 11 91 142 - -
Pral4068g00026 433 MobiDBLite consensus disorder prediction 288 361 - -
Pral4068g00026 433 MobiDBLite consensus disorder prediction 383 404 - -
Pral4068g00026 433 Gene3D - 92 134 - -
Pral4068g00026 433 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Pral4068g00026 433 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Pral4068g00026 433 PANTHER IQ-DOMAIN 5-RELATED 1 384 - -
Pral4068g00026 433 MobiDBLite consensus disorder prediction 17 39 - -
Pral4068g00026 433 MobiDBLite consensus disorder prediction 285 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4068g00026 Pral-Chr4068 197796 212511 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4068g00026 1 412 IQD Protein Family AT3G22190 58.134 2.48e-131 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4068g00026 - - qsa:O6P43_000537 533.487