Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4068g00020 ATGGATGTCGATTCCTCGATGGTGTCGGAAACCGATCAGGATCCAGTTTTGCAGAATAACAACACAGCTCAGCCTTCTGCGGCAATGGAAAGGGAGCAGCTTGAAGAGCAGCCGGCGTCAGCCGGCGGATCTCCATCGACTACCCAGTCACCGGTGCAGCAGCAGCAGCAGCAGGTGTCTTCTCAGGGGCAGCAGAGTTCTGTTATTGGACCTAGGCTCGCGCCAACTTACTCCGTGGTGAATGCAATAATTGAAAAGAAGGAGGACGGACCAGGGCCTAGGTGTGGCCACACCTTGACGGCCGTCGCAGCTGTTGGAGAGGAAGGTACACCTGGGTACATTGGCCCAAGGCTTATTTTGTTCGGTGGTGCCACTGCACTTGAAGGGAATTCGGCAGCTTCCGGGACTCCTTCTTCGGCAGGAAATGCTGGAATACGTCTAGCTGGTGCCACGGCTGATGTCCATTGTTATGACGTCTTAACAAATAAATGGTCCAGGATAACTCCCTATGGAGAACCTCCAACTCCAAGGGCTGCTCATGTGGCAACTGCTGTGGGAACAATGGTGGTTATTCAGGGTGGCATCGGTCCTGCTGGCTTGTCAGCAGAAGACCTTCATGTTCTTGACCTCACTCAGCAGCGGCCACGATGGCATAGGGTTGTTGTTCAAGGTCCTGGACCAGGACCTCGTTATGGACATGTGATGGCTTTGGTGGGGCAGAGATATCTAATGGCTATTGGAGGAAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGGCCACCGCCATGCATGTATGCAACTGCAAGTGCACGCTCTGATGGGCTTCTTTTACTTTGTGGGGGGAGGGATGCCAATAGTGTGCCGTTGGCAAGTGCATACGGTCTTGCAAAGCATAGGGATGGCCGATGGGAATGGGCAATTGCCCCTGTTTCACCATCTCCGAGATATCAGCATGCAGCTGTATTTGTTAATGCAAGGCTACATGTATCTGGAGGGGCTCTTGGTGGAGGGCGGATGGTAGAAGATTCGTCAAGTGTTGCAGTGTTGGATACTGCAGCTGGCGTTTGGTGTGATACAAAATCTGTTGTTACCAGTCCAAGGACAGGACGATACAGTGCGGATGCAGCTGGTGGGGATGCTTCAGTGGAGTTGACCCGGCGTTGTAGGCATGCAGCCGCTGCTGTTGGTGACCTAATTTTTATTTATGGTGGTTTACGTGGTGGAGTTTTGCTGGATGACCTCCTTGTTGCTGAAGATCTTGCTGCTGCTGAAACCACAACTGCTGCTTCACATGCAGCCGCAGCTGCTGCAACTAATTTACAACCAGGGTGCATGCCTGGACGATATGGGTTTGATGATAGATCAAGGCAAACAATGCCTGAAGCGGCTGCTGATGGGGCAGTTGTTCTGGGCAATCCCGTTGCTCCCCCTATAAATGGTGACATGTATACTGATATTAGCACTGAAAATGCCATGTTACAGGGATCAAGGCGAACTAGCAAAGGTGTTGAATATCTAGTTGAAGCATCAGCTGCTGAAGCTGAAGCTATCAGTGCCACATTGGCTGCTGCTAAGGCACGGCAAGTGAATGGTGAAGTTGATTTGCCTGACAGAGATGGTGGGGCTGAGGCTACTCCAAGTGGGAAGCCTATATCTTCTTTGATTAAGCCTGATTCTGCAGTATCAAATAGTATTACTCCTGGTGGAGTTAGACTGCATCATAGAGCTGTGGTTGTTGCTGCTGAGACTGGGGGGGCGTTAGGTGGGATGGTTAGACAGCTTTCCATTGACCAGTTTGAAAATGAAGGCAGGAGGGTCAGTTATGGAACTCCAGAAAATGCAACTGCAGCCAGAAAACTATTAGATAGGCAGATGTCTATTAATAGTGTTCCCAAAAAGGTCATAGCACACCTCTTAAAGCCTCGAGGCTGGAAACCACCAGTTCGCCGGCAATTTTTCTTAGACTGCAATGAAATTGCAGATCTTTGTGATAATGCAGAGCGGATATTTTCAAGTGAACCGAGTGTTTTACAACTTAGGGCACCCATTAAAATATTTGGTGATTTACATGGTCAATTTGGGGATCTTATGCGGCTTTTTGATGAGTATGGTGCACCATCAACTGCTGGTGACATAGCATATATTGACTATCTATTCCTAGGAGATTATGTTGACCGAGGCCAACACAGCCTGGAAACTATAACCCTTCTGCTTGCCCTGAAGGTTGAGTATCCAAACAATGTGCATTTAATACGTGGGAACCATGAAGCAGCAGATATTAATGCCCTTTTTGGTTTCCGGATTGAGTGCATTGAAAGGATGGGTGAGAGAGATGGAATTTGGGCATGGCATCGTATAAACCGGTTGTTTAATTGGCTTCCTCTAGCTGCTCTGATTGAGAAAAAAATTATTTGCATGCACGGGGGTATTGGCCGTTCGATTAATCATGTGGAACAGATTGAGAACATTCAGCGTCCAATTACAATGGAAGCAGGGTCAATTGTGCTCATGGATTTGTTGTGGTCTGATCCTACAGAGAATGACAGTGTGGAAGGTCTACGACCCAATGCTAGAGGTCCAGGGTTGGTTACTTTTGGGCCTGACCGTGTCATGGAATTCTGCAACAACAATGATCTTCAGCTGATTGTCCGTGCACACGAATGTGTCATGGATGGTTTTGAGCGCTTTGCTCAGGGACATCTTATAACACTTTTCTCAGCCACAAACTACTGCGGTACTGCCAATAATGCCGGGGCAATACTAGTTTTGGGTAGAGATCTTGTTGTGGTTCCTAAACTGATTCATCCATTGCCCCCTGCAATTTCTTCCCCGGAAGCATCACCAGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAACAGACCGCCAACACCAACTAGAGGCCGACCTCCAGTGGCAAATGACCGAGGTTCTCTTGCTTGGATATAA 3018 0.4864 MDVDSSMVSETDQDPVLQNNNTAQPSAAMEREQLEEQPASAGGSPSTTQSPVQQQQQQVSSQGQQSSVIGPRLAPTYSVVNAIIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPYGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGXSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAATNLQPGCMPGRYGFDDRSRQTMPEAAADGAVVLGNPVAPPINGDMYTDISTENAMLQGSRRTSKGVEYLVEASAAEAEAISATLAAAKARQVNGEVDLPDRDGGAEATPSGKPISSLIKPDSAVSNSITPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDNAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPEASPERHIEDTWMQELNANRPPTPTRGRPPVANDRGSLAWI 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4068g00020 1006 PRINTS Serine/threonine phosphatase family signature 921 937 IPR006186 GO:0016787
Pral4068g00020 1006 PRINTS Serine/threonine phosphatase family signature 809 835 IPR006186 GO:0016787
Pral4068g00020 1006 PRINTS Serine/threonine phosphatase family signature 703 730 IPR006186 GO:0016787
Pral4068g00020 1006 PRINTS Serine/threonine phosphatase family signature 738 765 IPR006186 GO:0016787
Pral4068g00020 1006 PRINTS Serine/threonine phosphatase family signature 771 795 IPR006186 GO:0016787
Pral4068g00020 1006 PRINTS Serine/threonine phosphatase family signature 899 919 IPR006186 GO:0016787
Pral4068g00020 1006 PRINTS Serine/threonine phosphatase family signature 839 866 IPR006186 GO:0016787
Pral4068g00020 1006 FunFam Serine/threonine-protein phosphatase 73 270 - -
Pral4068g00020 1006 Gene3D - 639 980 IPR029052 -
Pral4068g00020 1006 MobiDBLite consensus disorder prediction 39 71 - -
Pral4068g00020 1006 MobiDBLite consensus disorder prediction 982 1001 - -
Pral4068g00020 1006 MobiDBLite consensus disorder prediction 1 71 - -
Pral4068g00020 1006 FunFam Serine/threonine-protein phosphatase 274 473 - -
Pral4068g00020 1006 FunFam Serine/threonine-protein phosphatase 639 979 - -
Pral4068g00020 1006 SUPERFAMILY Metallo-dependent phosphatases 660 965 IPR029052 -
Pral4068g00020 1006 Pfam Calcineurin-like phosphoesterase 703 910 IPR004843 GO:0016787
Pral4068g00020 1006 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1006 - -
Pral4068g00020 1006 CDD MPP_Bsu1_C 655 957 IPR041758 -
Pral4068g00020 1006 Gene3D - 74 201 IPR015915 GO:0005515
Pral4068g00020 1006 SUPERFAMILY Kelch motif 149 438 IPR015915 GO:0005515
Pral4068g00020 1006 ProSitePatterns Serine/threonine specific protein phosphatases signature. 772 777 IPR006186 GO:0016787
Pral4068g00020 1006 Pfam Galactose oxidase, central domain 229 282 - -
Pral4068g00020 1006 Pfam Kelch motif 335 381 IPR011498 GO:0005515
Pral4068g00020 1006 Gene3D - 202 458 IPR015915 GO:0005515
Pral4068g00020 1006 SMART pp2a_7 675 959 IPR006186 GO:0016787
Pral4068g00020 1006 MobiDBLite consensus disorder prediction 1 28 - -
Pral4068g00020 1006 MobiDBLite consensus disorder prediction 554 581 - -
Pral4068g00020 1006 PIRSF STPPP_BSU1 26 1006 IPR012391 GO:0004721|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4068g00020 Pral-Chr4068 162388 173687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4068g00020 667 902 Calmodulin-binding Proteins AT5G63870 29.044 7.19e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4068g00020 - - zju:107403588 1777.68