Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4068g00007 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGTCGTGGAGCTTTTGGAGCTGCTATATTAGTCAATCACAAGGCTGAGAAAAAGAAATACGTGTTGAAGAAAATCAGACTTGCGCGACAGACTGAACGATGCAGAAGATCTGCTCATCAAGAGATGGCTCTCATTGCCCGAATCCAGCACCCTTACATCGTGGAATTTAAGGAGGCATGGGTTGAGAAGGGTTGCTATGTCTGCATTGTCACTGGCTACTGTGAAGGCGGAGACATGGCTGAATTGATGAAAAAATCAAATGGGGTTCACTTTCCTGAGGAGAAACTCTGTAAGTGGTTTACCCAGTTACTGTTAGCAGTGGAATATTTGCACGCTAACTTTGTTTTACATCGAGACCTGAAGTGTTCCAACATCTTTCTTACCAAGGATCACGATGTTCGCCTAGGGGATTTTGGGCTAGCTAAGACCTTAAAAGCAGATGATCTGGCTTCTTCGGTGGTGGGAACTCCGAATTACATGTGTCCTGAATTGCTTGCAGATATTCCTTACGGATTTAAATCTGATATTTGGTCGCTAGGGTGCTGTATATATGAGATGGCTGCTCATCGCCCTGCTTTTAAAGCTTTCGATATGGCAGGATTGATAAGCAAGATCAATCGTTCCTCCATTGGTCCTTTGCCTCCCTGTTATTCCCCATCTTTGAAAACGCTGATAAAGGGCATGCTGAGAAAAAGCCCTGAGCATCGACCAACAGCATCAGAGATCTTAAAGCATCCTTATTTGCAAACTTATGTTGAACAGTATCGTCCATCTTTCAGTCCTCCAACATCCTGTTCTCCTGAAAAGCCTCTTCCTGTTACTGATGATCCTCGAAGAAATATGGCTGAAAGTCAAAACAGTTGCAGTTCAAGCAGCGACAAAGATAGTTCAGTGTCAAATGACAAAATCATTTCAACAGTGGTGCAGAAGTGCAATAACAAAACCACTGAGACAGATATAACCTCCATCGATGATGAGGATGGCTCTGAGCATATCCCGCCTAGTGAAGAAGATACTAGCTCCAGCACTAGTAATGCCAAAGTAGATTGCCAGGAGGTGATGAAACCACCATCTAATGAACGTCAATCAATTGCTGAATCTAAACAACCAAAAACAATTAAAAACATAATGATGGCACTAAAAGAGGGAAAGGTTAGAGAAAATGGTTCTCCAATGAGAGGCAACCGCATTAAGGCTGTTGGTGCATCAGCGCAGAAAACAAATGCAGATACACTGCCTAAATTGCCCAAGTCCAGTGCTGTTGCTCCTGGTATCAAGCCAAATTTAGAGTCTCCAACTTTGACATCGGCAAAGACATCACCTGATCCTTCCAGACGAATGCCAAGGTCACATCCTCTAAAGAATCAGGCACTACTGATGGTGGACTCTTCACCAAAAACTAAACCCAGACACGATGGGACTCCCCCATCTGGTCCTATTAAACAAGTTGAAGGAGACGGAGTTTCTGCCAAGGCGAGGCAAGGGACCCCCCCTAGTTTACTGAGACAGCCTTCATTTAGAGGAGGAATGAGGCAGGTTGGGCTTGATGTACGCAACGCAGCAAATGATACAGAGAAGTTAGGTCCAAAAAAAATATTGCAGGAGCCGGACAAGAGTCATTATAAGGTGCTCGATGGTCATACAACACGTGCTTCTAGAGAGCCTACAGAGCCTCAGAAGGCTTATGAAAAATGTTCCAAAGGAATGCAGACAGATAGCAGTAATTCTGTTTCATCTTCAGTGTCTATTCAAGGATGTGAGCTTTCTGATGATGCAACAAATATTATTGACATGAGAAAACAGAAGCCTTCTGATCGTGGGAGTACAACACATGCTGAAATTATGAAGTCACATCCAGGCAAAAGTCATTATCAGTCACCCAATGGTCATACACCGCGGGCTTCTAGTGAGATCATTGAGCCTCAGAAGGCTTCTGAAAAATGTTACAAAGGAATGCAGGCAGATAGCAGTAATTCTGTTTCATCTTCAGTTTCTATTCAAGGATTTGAACTTTCTGATGATGCAACAAATTTTATTGACACGACAGTACAGACGCCTTCTGATCACGGGAATGCAACACATATTGGAATTATAAAATCACATCCAGGCAGCAGCCCACCTGCAACCTATTTGCACTGTGAGATGGCTGAAACAATATCTACGGAAGCCTCTGAGCCCACTTTGAATCTTCAGAATACAATTACTAACAATGAGAAAGGAAGTTCCAGATTAACTCCTGATCACCATGCTCCAGATTCCAAGGAAATATTGGCTTCTGAAGATAGTCTCCACATCAATCAGACAAGTACTTCGACTGCCACTTCATGTGATAATAGATCTACAAGTCCCTCTGTTGTGGCCGGCGAAGAAATTAAAGATCTTCAGGATACTACTAAGCAAGTGACTTCAACCCAACCTCCTAAACCTCCTCAATTGAGTGCTGGAGAAAAGTTTGTTTGTGGGGAGGTCGCTTCATTAAGCAAGCCCGGTAATAGGCCTGACACAGTAGTTGGCCAGCCAAAACCCCTGCTTGAGTCCACTGGTGATGACAAGTTCACTGTAAGGGAAAGACTGGCATCTGCGGCTGAAACTGCTCCACCAATCACCTCTACCAATGACCAAAAAAGCTTGCAAGAAGATAAAGGAACCATTTTGCATAAGCCAGTGATAGAAAGGCCAGCTGTTGGTAATCTTCCTCCAGCTTTTGATGATGTCATCCATGTTATACGACATAGCAGTTACCGGGTTGGGAGTGAACAACCAGTAAAGGAACCTGGGGAGATGGGAGTTCAAAACGTGGATGTTAGTAAATTTCTCAATGCTGTCAGGGATGATTTAGAAATGAGAAACGCGGGCACTTCTCTGACCCATAATTCCTCAAATTGTTCTGAAGCTGCGAGCTTGAAGCCTAACATTTCTGATCAGTTAGACATGAGAAGCATGAGCACTGCTCCAGCTCCAAAACCCTCGAGTTGCTTTGATGCTCTGTGCACGAAGCCAAGTGTCTCTGATCATTCCAGTGTCAAGGAACAAGACGTGAAAAATCTTGTTTCTCTAGTTTCAAAATCCGATTCCCCTGCGTTGACTAAATGTAACTCTTCAGTGACTGAAGAGGAAAGCCCGGCAAAGGAAACTTTGGATGTTAAATCATTCAGGCAGAGAGCAGATGCTCTTGAAGGGCTCTTGGAATTGTCTGCAGATTTACTGCAGCAAAATAGATTGGAGGAGCTTGCTGTTGTTCTGAAGCCCTTTGGGAAAGATATGGTATCCCCAAGAGAGACAGCCATTTGGTTGGCTAAAAGCTTAAAGGGAATGATGAGCGACGACAATGGTGGACGTTGA 3384 0.4391 MESRMDQYEIMEQIGRGAFGAAILVNHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGVHFPEEKLCKWFTQLLLAVEYLHANFVLHRDLKCSNIFLTKDHDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKSPEHRPTASEILKHPYLQTYVEQYRPSFSPPTSCSPEKPLPVTDDPRRNMAESQNSCSSSSDKDSSVSNDKIISTVVQKCNNKTTETDITSIDDEDGSEHIPPSEEDTSSSTSNAKVDCQEVMKPPSNERQSIAESKQPKTIKNIMMALKEGKVRENGSPMRGNRIKAVGASAQKTNADTLPKLPKSSAVAPGIKPNLESPTLTSAKTSPDPSRRMPRSHPLKNQALLMVDSSPKTKPRHDGTPPSGPIKQVEGDGVSAKARQGTPPSLLRQPSFRGGMRQVGLDVRNAANDTEKLGPKKILQEPDKSHYKVLDGHTTRASREPTEPQKAYEKCSKGMQTDSSNSVSSSVSIQGCELSDDATNIIDMRKQKPSDRGSTTHAEIMKSHPGKSHYQSPNGHTPRASSEIIEPQKASEKCYKGMQADSSNSVSSSVSIQGFELSDDATNFIDTTVQTPSDHGNATHIGIIKSHPGSSPPATYLHCEMAETISTEASEPTLNLQNTITNNEKGSSRLTPDHHAPDSKEILASEDSLHINQTSTSTATSCDNRSTSPSVVAGEEIKDLQDTTKQVTSTQPPKPPQLSAGEKFVCGEVASLSKPGNRPDTVVGQPKPLLESTGDDKFTVRERLASAAETAPPITSTNDQKSLQEDKGTILHKPVIERPAVGNLPPAFDDVIHVIRHSSYRVGSEQPVKEPGEMGVQNVDVSKFLNAVRDDLEMRNAGTSLTHNSSNCSEAASLKPNISDQLDMRSMSTAPAPKPSSCFDALCTKPSVSDHSSVKEQDVKNLVSLVSKSDSPALTKCNSSVTEEESPAKETLDVKSFRQRADALEGLLELSADLLQQNRLEELAVVLKPFGKDMVSPRETAIWLAKSLKGMMSDDNGGR 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4068g00007 1127 MobiDBLite consensus disorder prediction 606 653 - -
Pral4068g00007 1127 MobiDBLite consensus disorder prediction 443 457 - -
Pral4068g00007 1127 MobiDBLite consensus disorder prediction 293 314 - -
Pral4068g00007 1127 MobiDBLite consensus disorder prediction 635 649 - -
Pral4068g00007 1127 MobiDBLite consensus disorder prediction 772 865 - -
Pral4068g00007 1127 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4068g00007 1127 MobiDBLite consensus disorder prediction 331 360 - -
Pral4068g00007 1127 FunFam Serine/threonine-protein kinase Nek2 5 87 - -
Pral4068g00007 1127 MobiDBLite consensus disorder prediction 367 386 - -
Pral4068g00007 1127 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 1077 - -
Pral4068g00007 1127 Gene3D Transferase(Phosphotransferase) domain 1 90 340 - -
Pral4068g00007 1127 MobiDBLite consensus disorder prediction 370 384 - -
Pral4068g00007 1127 CDD STKc_Nek 7 262 - -
Pral4068g00007 1127 MobiDBLite consensus disorder prediction 415 520 - -
Pral4068g00007 1127 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Pral4068g00007 1127 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4068g00007 1127 FunFam Serine/threonine-protein kinase Nek5 90 335 - -
Pral4068g00007 1127 MobiDBLite consensus disorder prediction 774 799 - -
Pral4068g00007 1127 MobiDBLite consensus disorder prediction 272 314 - -
Pral4068g00007 1127 SUPERFAMILY Protein kinase-like (PK-like) 4 319 IPR011009 -
Pral4068g00007 1127 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Pral4068g00007 1127 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4068g00007 1127 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Pral4068g00007 1127 MobiDBLite consensus disorder prediction 607 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4068g00007 Pral-Chr4068 32278 39760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4068g00007 14 263 MAP Kinase Kinase Kinase AT1G53570 31.373 5.65e-36 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Pral4068g00007 Pkinase 8.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4068g00007 K08857 - gmx:100818747 1249.19