Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4067g00065 ATGGAGGCGCCTTACCCTGGTTTTCGCTTCTACCCTACAGAAGAAGAGCTCGTCTCCTTCTACCTCCACAACAAGCTCGAAGGTCTCAGACCAGACATGGACAGAGTCATTCCTGTTGTTCAAATCCACGACGTCGAACCTTGGAACCTCCCACAGCTTGCAGGAGAGATGTGTCGTGGTGATACAGAGCAGTGGTTCTTCTTCTCCCCGAGGCAGGAAAGAGAAGCCAGAGGAGGGAGGCCAACCAGAACCACTGCTTCAGGGTACTGGAAAGCCACCGGTTCTCCTGGTCACGTTTACTCTTCCGATAACAGAGTGATCGGCGTGAAGAAAACGATGGTCTTTTACAGAGGAAAAGCTCCCACGGGAAGGAAAACCAAGTGGAAGATGCATGAATATAGAGCCATTGAACCATCCAGCTCTAACCAATCCGCCGCCTCCATTCCCACGTTGAGGCACGAATTCAGCTTGTGCCGAGTTTACGTCATATCGGGGAGCTTCAGAGCATTTGATCGACGGCCATTAGAGGCGGAGGGAGCTTCTGGTTCTGGCGGAAGAAGGGACGTCGATAGAGCAGGCTCGTCGGACGACACTTCAAACTCAGGAGCAGACCATGCAGAAGCGGGAGGATCCAGCAGTGCAAATCGGAATGTCAATGATGAGACTGTACCGGAGCCTCTATGGGAATGGGAACAACTTAACTGGCTCTAA 711 0.5232 MEAPYPGFRFYPTEEELVSFYLHNKLEGLRPDMDRVIPVVQIHDVEPWNLPQLAGEMCRGDTEQWFFFSPRQEREARGGRPTRTTASGYWKATGSPGHVYSSDNRVIGVKKTMVFYRGKAPTGRKTKWKMHEYRAIEPSSSNQSAASIPTLRHEFSLCRVYVISGSFRAFDRRPLEAEGASGSGGRRDVDRAGSSDDTSNSGADHAEAGGSSSANRNVNDETVPEPLWEWEQLNWL 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4067g00065 236 Pfam No apical meristem (NAM) protein 6 134 IPR003441 GO:0003677|GO:0006355
Pral4067g00065 236 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 186 - -
Pral4067g00065 236 Gene3D NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Pral4067g00065 236 MobiDBLite consensus disorder prediction 176 236 - -
Pral4067g00065 236 MobiDBLite consensus disorder prediction 195 220 - -
Pral4067g00065 236 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Pral4067g00065 236 ProSiteProfiles NAC domain profile. 4 163 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4067g00065 Pral-Chr4067 386005 387182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4067g00065 7 235 NAC Transcription Factor Family AT5G22380 60.851 8.76e-93 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4067g00065 NAM 2.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4067g00065 - - qsu:112025473 338.961