Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4067g00044 ATGGCGAGTCACAGAATAGGACAGACTGGTTTGTCTGAGTCATCGCCTTCAGGTCATCACTATGGAGTAGTTCACGGAATTAATAATACTGCTGCAGCATCCACCAGCTTAATCAATCAAGGGACTGCTTTTGATTTTGGAGAGCTGGAAGAGGCAATTGTTCTGCAAGGAGTAGAGATTAGAAATGATGAAGGCAGAGCACCTTTATTCACGTCCAGGCCAGCAGCTACTACTCTGGAAATGTTCCCCTCTTGGCCAATCAAATTTCAGCAAACCCATAGAGTAGCAGGAGGATCAAAGTCAGGAGGAGAAAGCACTGATTCTGGGTCAGGTGTTAACACCATATCGAGCAAAAGTGAGCATCAGTTCGAATTTGAACCAGAATCTCCCATTAGTAAGAAAGCTTCTTCATCTTCAGACCTTCATCATCATCAGAAGCAACAGCAACTTCAACACGAGATGGCAGGTGATGCCTCAAGAGCAGGCCCATCACAGAATCAATCACCTGCCAAATCACCGCAGGAAAAGAGGAAGGGAGCCGGTTCTTCATCCGAAAAACAACTTGATGCAAAGACACTGAGACGTCTAGCTCAAAACAGAGAGGCTGCTCGGAAGAGCCGTTTGAGAAAGAAGGCCTACGTGCAGCAGCTAGAGTCCAGTAGGATAAAGCTCACTCAGCTTGAGCAAGACCTTCAAAGAGCTCGCTCACAGGGACTGTTCTTGGGCTGTGCTGGTGCCGGGGGCAACATAAGCTCTGGAGCTGCAATATTTGATATGGAATACGCAAGATGGATAGAGGAAGACCACCGGCACATGATGGAGTTGAGAGCGGCGCTGCAGGCGGCGTTATCGGACAGCGAGTTAAGAATAATGGTGGATGGATATCTGTCGCATTACGATGAGATCTTCAGGCTCAAAGGCGTCGCTGCAAAAACAGACGTGTTTCATCTTATTACTGGCATGTGGACTTCTCCTGCTGAACGCTGCTTCCTTTGGATGGGCGGTTTCCGACCCTCTGAGCTCATCACGATGTTGATACAGCAGTTAGAGCCACTGGCTGAGCAGCAGATTATGGGAATGTATGGCCTCAGACATTCCTCACAGCAAGCAGAAGAGGCTCTCTCTCAAGGCCATGAACAACTCCAGCAGTCCCTTGTTGACACCATTGCCGGTGGCCCGGTCGGCGACGGCGTTCAACAGATGGTCATCGCCATGAGCAAGCTCTCCAATCTCGAAGGATTCGTCCGCCAGGCGGATAATTTGAGGCAACAGACACTGCACCAGTTATGCAGATTGCTGACAATTCGACAAGCCGCAAGATGTTTCCTTGTAATGGGAGAGTACTATGGTCGCCTTCGTGCCCTTAGTTCTCTCTGGGCTTCAAGACCTCGAGAGACGTTGATGAACGAGGATAACCCGTGCCAAACGACAACGACGGACTTGCAAATGGTGCAACCTCATCATCACCATCATCAGAATCATTTTGCTGGTTTCTGA 1497 0.4916 MASHRIGQTGLSESSPSGHHYGVVHGINNTAAASTSLINQGTAFDFGELEEAIVLQGVEIRNDEGRAPLFTSRPAATTLEMFPSWPIKFQQTHRVAGGSKSGGESTDSGSGVNTISSKSEHQFEFEPESPISKKASSSSDLHHHQKQQQLQHEMAGDASRAGPSQNQSPAKSPQEKRKGAGSSSEKQLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDLQRARSQGLFLGCAGAGGNISSGAAIFDMEYARWIEEDHRHMMELRAALQAALSDSELRIMVDGYLSHYDEIFRLKGVAAKTDVFHLITGMWTSPAERCFLWMGGFRPSELITMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGHEQLQQSLVDTIAGGPVGDGVQQMVIAMSKLSNLEGFVRQADNLRQQTLHQLCRLLTIRQAARCFLVMGEYYGRLRALSSLWASRPRETLMNEDNPCQTTTTDLQMVQPHHHHHQNHFAGF 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4067g00044 498 SMART brlzneu 187 252 IPR004827 GO:0003700|GO:0006355
Pral4067g00044 498 MobiDBLite consensus disorder prediction 178 192 - -
Pral4067g00044 498 CDD bZIP_HBP1b-like 191 242 - -
Pral4067g00044 498 Pfam Seed dormancy control 271 346 IPR025422 GO:0006351|GO:0043565
Pral4067g00044 498 MobiDBLite consensus disorder prediction 94 120 - -
Pral4067g00044 498 Coils Coil 210 237 - -
Pral4067g00044 498 FunFam BZIP family transcription factor 190 239 - -
Pral4067g00044 498 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 194 209 IPR004827 GO:0003700|GO:0006355
Pral4067g00044 498 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 189 233 IPR004827 GO:0003700|GO:0006355
Pral4067g00044 498 ProSiteProfiles DOG1 domain profile. 254 462 IPR025422 GO:0006351|GO:0043565
Pral4067g00044 498 SUPERFAMILY Leucine zipper domain 191 234 IPR046347 GO:0003700|GO:0006355
Pral4067g00044 498 PANTHER TRANSCRIPTION FACTOR TGA9 125 465 - -
Pral4067g00044 498 Pfam bZIP transcription factor 190 232 IPR004827 GO:0003700|GO:0006355
Pral4067g00044 498 MobiDBLite consensus disorder prediction 92 192 - -
Pral4067g00044 498 Gene3D - 190 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4067g00044 Pral-Chr4067 262866 269911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4067g00044 143 498 bZIP Transcription Factor Family AT1G08320 69.167 3.58e-180 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4067g00044 DOG1 3.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4067g00044 K14431 - gmx:100775461 714.146