Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4067g00035 ATGGCGGAAGAACATAGATGCCAAGCTCCGCGCCTTTGTGCCAACAACTGCGGCTTCTTCGGTAGTCCTGCGACGCAGAATCTCTGTTCCAAATGCTACAGAGATTTGCAGCTCAAGGAGCAACAATCCTCTTCGGCCAAGCTGGTTCTCAATCAGTCCATAGTCCCTCAGCCGTCCACGGCGGAGAAATCGGAGTCATCTTCGTCGTCGCTGGAACCTGTTGCCGATCTTTCGTCTTCGGTTGCTGTTGCGGCTGATCCGGCGCCTCAGGCGGAGGAGCCGAAGAGCGCTTCACCGGCTCAGCCGAATAGGTGCATGACGTGCAGGCGGCGCGTGGGGCTCACCGGGTTCAAGTGCCGGTGCGGGTCGACGTACTGCGGGGCCCACCGATACCCGGAACAGCACGGGTGCGAGTTCGACTTCAAGACGATGGGCCGGGAGCAGATCGCGAAGGCCAATCCAATAGTGAAGGCCGATAAGCTAGAAAAGATCTGA 495 0.5859 MAEEHRCQAPRLCANNCGFFGSPATQNLCSKCYRDLQLKEQQSSSAKLVLNQSIVPQPSTAEKSESSSSSLEPVADLSSSVAVAADPAPQAEEPKSASPAQPNRCMTCRRRVGLTGFKCRCGSTYCGAHRYPEQHGCEFDFKTMGREQIAKANPIVKADKLEKI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4067g00035 164 Gene3D - 1 79 - -
Pral4067g00035 164 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Pral4067g00035 164 SMART AN1_Zf_4 105 142 IPR000058 GO:0008270
Pral4067g00035 164 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Pral4067g00035 164 MobiDBLite consensus disorder prediction 57 76 - -
Pral4067g00035 164 SUPERFAMILY AN1-like Zinc finger 89 159 IPR035896 -
Pral4067g00035 164 Pfam AN1-like Zinc finger 105 141 IPR000058 GO:0008270
Pral4067g00035 164 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Pral4067g00035 164 Gene3D - 80 160 IPR035896 -
Pral4067g00035 164 MobiDBLite consensus disorder prediction 57 102 - -
Pral4067g00035 164 ProSiteProfiles Zinc finger AN1-type profile. 99 145 IPR000058 GO:0008270
Pral4067g00035 164 FunFam Zinc finger AN1-type containing 6 79 160 - -
Pral4067g00035 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 59 - -
Pral4067g00035 164 PANTHER AN1-TYPE ZINC FINGER PROTEIN 9 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4067g00035 Pral-Chr4067 209068 210056 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4067g00035 1 164 C2H2 Transcription Factor Family AT3G52800 53.179 4.91e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4067g00035 - - qsa:O6P43_028515 238.039