Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4067g00023 ATGAAGGTGATTGCAGCGTATTTGCTGGCAGTGTTGGGAGGGAACACATCCCCTTCAGCTGATGATATAAAGAATATTCTTGGCTCAGTTGGGGCTGAGGCTGAAGATGAGAGGATTGAGCTTCTCTTAAATGAAGTTAATGGCAAAGATATTACCGAACTAATTGCTGCTGGAAGAGAAAAGCTGGCCTCAGTTCCAGGCGGCGGAGGTGCGGTTGCTGCCGTTGCTGCACCTGCTGGTGGTGCTGCAGCCGGTGGAGCGGCACCTGCTGCTGAGGCAAAGGAGGAGAAGAAGGTGGAGGAGAAAGAGGAGTCTGATGAGGACATGGGTTTCAGCTTATTCGACTAA 348 0.5115 MKVIAAYLLAVLGGNTSPSADDIKNILGSVGAEAEDERIELLLNEVNGKDITELIAAGREKLASVPGGGGAVAAVAAPAGGAAAGGAAPAAEAKEEKKVEEKEESDEDMGFSLFD 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4067g00023 115 Gene3D - 1 59 IPR038716 -
Pral4067g00023 115 MobiDBLite consensus disorder prediction 82 115 - -
Pral4067g00023 115 Pfam 60s Acidic ribosomal protein 17 114 - -
Pral4067g00023 115 MobiDBLite consensus disorder prediction 91 105 - -
Pral4067g00023 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Pral4067g00023 115 FunFam 60S acidic ribosomal protein P2 1 59 - -
Pral4067g00023 115 Hamap 50S ribosomal protein L12 [rpl12]. 2 115 IPR027534 GO:0003735|GO:0005840|GO:0006414
Pral4067g00023 115 CDD Ribosomal_P2 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4067g00023 Pral-Chr4067 90753 92541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4067g00023 1 115 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 66.087 4.96e-33 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4067g00023 K02943 - qsu:111996733 135.576