Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4067g00021 ATGAGGACGCTGTGCAATTCCGGAGGGAACCTTATTAATTTACGATTTTGCCACTGTCCTCAATTCCGCTCCTCGAACGCACCATTTCTTATTCCTTCATCACGGATTACTTGCCTCTCTCGCAGAAACCCCACTGCTGCAATTTCCTACAAACACAGTCTCTTTTCTCCTTCCGGGTTGTCGCCGATTCAAGCATCGATGGCATCTTCTACCTCATCCATTGGCACAGAGGAGACGAAGCCATTCTCTGTGCTCTTTGTTTGCCTCGGCAACATCTGTAGGAGCCCGGCCGCTGAAGGGGTCTTCAGACACTTGGTCAACAAAAGGGCTTTAGATTCCAAGTTCAAGATTGATTCTGCTGGCACGATTAATTACCATGAAGGGAATGAAGCGGACCCAAGGATGAGAGCGGCCTCTAAAAGGCGAGGAATTCAGATAACCTCCATTTCTAGGCCAATTCAACCATCAGATTTCCGAGATTTTGATCTTATTCTTGCCATGGACAAGCAAAACAGAGAGGACATATTAGAGGCATTCAGTAGATGGAAGTCTAGAGATGCTTTGCCAGCTGATGCATACAAGAAGGTTAAATTGATGTGCTCATATTGTAAAAAACATGATGAAACTGAAGTCCCAGATCCTTACTATGGCGGACCACAAGGGTTTGAGAAGGTGTTAGATTTGCTTGAAGATGCTTGTGAATCATTGTTGGACGAGGTTTTGGCAGAGCATAAACATTTGCAAGAATGA 750 0.4507 MRTLCNSGGNLINLRFCHCPQFRSSNAPFLIPSSRITCLSRRNPTAAISYKHSLFSPSGLSPIQASMASSTSSIGTEETKPFSVLFVCLGNICRSPAAEGVFRHLVNKRALDSKFKIDSAGTINYHEGNEADPRMRAASKRRGIQITSISRPIQPSDFRDFDLILAMDKQNREDILEAFSRWKSRDALPADAYKKVKLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLDEVLAEHKHLQE 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4067g00021 249 CDD LMWPTP 83 238 - -
Pral4067g00021 249 PRINTS LMW phosphotyrosine protein phosphatase signature 211 226 IPR017867 GO:0004725|GO:0006470
Pral4067g00021 249 PRINTS LMW phosphotyrosine protein phosphatase signature 84 101 IPR017867 GO:0004725|GO:0006470
Pral4067g00021 249 PRINTS LMW phosphotyrosine protein phosphatase signature 127 143 IPR017867 GO:0004725|GO:0006470
Pral4067g00021 249 Gene3D - 65 245 - -
Pral4067g00021 249 SMART LMWPc_2 82 239 IPR023485 -
Pral4067g00021 249 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 52 245 - -
Pral4067g00021 249 Pfam Low molecular weight phosphotyrosine protein phosphatase 84 237 IPR023485 -
Pral4067g00021 249 FunFam Low molecular weight protein-tyrosine-phosphatase 81 245 - -
Pral4067g00021 249 SUPERFAMILY Phosphotyrosine protein phosphatases I 80 240 IPR036196 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4067g00021 14 243 Protein tyrosine phosphatase (PTP) family AT3G44620 57.480 5.73e-91 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4067g00021 K25307 - qsa:O6P43_000441 341.658