Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4067g00010 ATGGACTTTAAGAATGGATCTTCTTCATGCTCACCACGAAACCCTAGCCCTCCTGCATCTCATAAGAGGAAAGCAGGAAGAAAGAAATTTCAGGAGACTCGACATCCTCTCTTTCGAGGTGTCCGGCGAAGGAACGGTAACCGGTGGGTTTGTGAAGTCCGGGAACCGAAAAAGAAGTCCAGGATTTGGCTCGGCACTTACCCTAATCCAGAAATGGCGGCTAGGGCACACGACGTGGCTGCCCTGGCTCTCCGAGGCAGCTCGGCTGCTCTCAATTTCCCTGACTCAGCTTGGCTCCTCCCGGTCGCCACCTCATCCTCCGCCAAGGACATCAGAGCAGCTGCGGCCGAAGCCGCCCACGCTTTCCGACCAACCTCCTCAAATGCTCATCAGAACATTAGAGAGCCTTTTTTCTCAGTTGAAGAAAAGGAAAAGAGCAATAGTGAAGGTGGTGATGAGTGTCGAAGTTTGTTCTTGGACGAGGAGGCATTGTATAATATGCCGAGCCTGTTAGATCATATGGCCGAGGGTCTGCTTCTTAGCCCTCCTTCTATCTGCCGGAGGGCCTTGGGTTTAGGTTTGGACGATGATTTTACGTGTCAAGTAGACTTGACTTTATGGCAAGACGACTAA 633 0.515 MDFKNGSSSCSPRNPSPPASHKRKAGRKKFQETRHPLFRGVRRRNGNRWVCEVREPKKKSRIWLGTYPNPEMAARAHDVAALALRGSSAALNFPDSAWLLPVATSSSAKDIRAAAAEAAHAFRPTSSNAHQNIREPFFSVEEKEKSNSEGGDECRSLFLDEEALYNMPSLLDHMAEGLLLSPPSICRRALGLGLDDDFTCQVDLTLWQDD 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4067g00010 210 Pfam AP2 domain 36 86 IPR001471 GO:0003700|GO:0006355
Pral4067g00010 210 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Pral4067g00010 210 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Pral4067g00010 210 FunFam Ethylene-responsive transcription factor 2 36 95 - -
Pral4067g00010 210 Gene3D AP2/ERF domain 37 95 IPR036955 GO:0003700|GO:0006355
Pral4067g00010 210 MobiDBLite consensus disorder prediction 1 16 - -
Pral4067g00010 210 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 16 208 IPR045277 GO:0003700
Pral4067g00010 210 CDD AP2 49 96 IPR001471 GO:0003700|GO:0006355
Pral4067g00010 210 SUPERFAMILY DNA-binding domain 37 96 IPR016177 GO:0003677
Pral4067g00010 210 MobiDBLite consensus disorder prediction 1 41 - -
Pral4067g00010 210 PRINTS Ethylene responsive element binding protein signature 76 96 IPR001471 GO:0003700|GO:0006355
Pral4067g00010 210 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4067g00010 Pral-Chr4067 56037 56669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4067g00010 7 210 AP2-EREBP Transcription Factor Family AT5G51990 50.000 5.93e-59 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4067g00010 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4067g00010 - - pcin:129313218 263.848