LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4065g00073	ATGGCGGAGGATCGGAACGGTGATGGCAATGAGGTAAGTGATTATACTTCGGAGGACGAAGGGACCGAGGACTACAGACGAGGAGGTTATCACGCCGTTCGAATTGGTGACACTTTCAAAAATGGGTGCTACGTGGTGCAAAGCAAACTCGGCTGGGGTCATTTTTCTACTGTCTGGCTCGCTTGGGATACCCAGAGATCGCGTTATGTAGCCCTAAAAATTCAAAAGAGTGCCCAGCGCTACACCGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAGATTGCTGAAGGGGATTTGGATGACAAGAAAAGTGTCGTCAAGCTTTTGGATCACTTCAAGCATTCAGGACCTAATGGCCAGCATGTGTGTATGGTTTTTGAATTCTTGGGCGACAATCTGCTGACCCTTATAAAGTATAGTGATTACCGGGGGATTCCTATCTCATTGGTTAAAGAAATTTGTTTCCATATTCTGGTGGGATTGGATTACTTGCATCGTGAGCTATCTGTAATACACACAGATTTGAAGCCAGAGAATGTCTTGCTTCTGTCAATGATAGATCCATCCAAAGATCCTAGAAAATCAGGTGTTCCGCTTATCCTTCCAAATACCAAGGATAAGGCCATTTCCAAACATGGGGCCGCAAAAGACAGTAATAGTTCAAAAGGGGATTTGACCAGGAACCAGAAAAAGAAATTGCGGAAAAAGGCTAAAAAGGCTGCTCAAAGTTGTGTTGAGAAGGAGAGTCCCAAGGAAGGTGAAGAGGATTCTAAACCACCTGAAGTAAAAGATTGTGGTGATGATGGGGAACTGATTGTGGAATCTTTTGAAGATAAATCTAGTAGTCTTGTAACCAAAGATGAATCAATTGAACTTGTTGAAACCAAGGACATCCCAAAAGGTATTCATGGTCAACTGAGAGTTAGTCGTTCCATGAAAAAAAAGTTGCTTGCTGCTGTTGATCTTAAATGCAAGCTGGTTGATTTTGGAAATGCCTGTTGGACTTATAAGCAATTCACGAATGATATTCAGACAAGGCAGTATAGGTGTCCTGAGGTTATTCTTGGGTGCAAATATTCAACTCCGGCTGATTTATGGTCTTTTGCTTGCATTTGCTTTGAGCTTTCCACAGGTGATGTTCTTTTTGATCCCCACAGTGGTGACAACTATTCAAGGGATGAGGATCATTTGGCATTGATGATGGAACTTCTTGGAATGATGCCTCGCAAGATTGCTCTAGGCGGTCGCTATTCTCTCGAGTTTTTTAATAGACATGGTGATTTAAGGCACATCCGCCGGTTGCGTTTCTGGCCTCTTAGTAAGGTGCTGATGGAGAAGTATGATTTTGGTGAGCAAGATGCAAATGACATGGCTGACTTCCTTGTTCCGATGCTTGATTTTACCCCCGAAAAGAGGCCAACAGCTGCTCAGTGCCTTAATCATCCATGGATCTCTGCAGGTCCTCGGACTCTTGAACCCTCAGTGACTACTGTCCAGTCTGATGCCACAGACAAGGTAGTGCCTGAAAAGATGGAGGAAAAGGCTGAGTTGGGGGCAGTTGAAGCTGGTGTGCGGAATATAACTATTGATGGATCTCCAAAGGCACTCAAAGATTCATAG	1623	0.4375	MAEDRNGDGNEVSDYTSEDEGTEDYRRGGYHAVRIGDTFKNGCYVVQSKLGWGHFSTVWLAWDTQRSRYVALKIQKSAQRYTEAAMDEIKILKQIAEGDLDDKKSVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGIPISLVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSMIDPSKDPRKSGVPLILPNTKDKAISKHGAAKDSNSSKGDLTRNQKKKLRKKAKKAAQSCVEKESPKEGEEDSKPPEVKDCGDDGELIVESFEDKSSSLVTKDESIELVETKDIPKGIHGQLRVSRSMKKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGCKYSTPADLWSFACICFELSTGDVLFDPHSGDNYSRDEDHLALMMELLGMMPRKIALGGRYSLEFFNRHGDLRHIRRLRFWPLSKVLMEKYDFGEQDANDMADFLVPMLDFTPEKRPTAAQCLNHPWISAGPRTLEPSVTTVQSDATDKVVPEKMEEKAELGAVEAGVRNITIDGSPKALKDS	540

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4065g00073	540	SMART	serkin_6	44	485	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4065g00073	540	ProSitePatterns	Protein kinases ATP-binding region signature.	50	73	IPR017441	GO:0005524
	Pral4065g00073	540	SUPERFAMILY	Protein kinase-like (PK-like)	39	496	IPR011009	-
	Pral4065g00073	540	MobiDBLite	consensus disorder prediction	1	23	-	-
	Pral4065g00073	540	MobiDBLite	consensus disorder prediction	209	266	-	-
	Pral4065g00073	540	Gene3D	Phosphorylase Kinase; domain 1	20	126	-	-
	Pral4065g00073	540	PANTHER	PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED	15	497	-	-
	Pral4065g00073	540	FunFam	Serine/threonine-protein kinase SRPK-like protein	315	485	-	-
	Pral4065g00073	540	MobiDBLite	consensus disorder prediction	240	266	-	-
	Pral4065g00073	540	ProSiteProfiles	Protein kinase domain profile.	44	485	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4065g00073	540	CDD	STKc_SRPK	33	485	-	-
	Pral4065g00073	540	Gene3D	Transferase(Phosphotransferase) domain 1	127	486	-	-
	Pral4065g00073	540	FunFam	CMGC/SRPK protein kinase	30	129	-	-
	Pral4065g00073	540	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	171	183	IPR008271	GO:0004672\|GO:0006468
	Pral4065g00073	540	Pfam	Protein kinase domain	44	184	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4065g00073	540	Pfam	Protein kinase domain	321	485	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4065g00073	Pral-Chr4065	332242	336319	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4065g00073	1	535	EF-hand Containing Proteins	AT5G22840	66.544	0.0	716

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_SRPK	Pral4065g00073		Pkinase	3.8e-21	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4065g00073	K08832		-	gmx:100791829	862.448