Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4065g00020 ATGCAGAGATCTGGATATGGCCGTGATGGAATTTACAGGTCTCTCAGGCCCTCTCCCGTGTTTCCCAGGGACGAGAATCTCTCTCTCGTTTCATTTCTCTTTGGAAACGTCGCCTCTTTTCCCACCAAACCTGCCTTGTTTGACGCTGATTCCTCCCAATCTCTGTCCTTCGCTCAGCTCAAGTCCTTAGTAGTGAAAGTCTCCCATGGCTTTCTGCGCCTGGGCATCAAGAAAAACGATGTTGTCCTCTTGTTTGCGCCCAACACCATCCTCTACCCTGTCTGCTTCCTCGGGGTCACGGCGGTTGGCGCCATAGCCTCCACCGCCAACCCTATCTACACGGTCGCCGAGATTGTCAAGCAAGTGAAAGATTCCAATCCCAAGCTCGTAATTACTGTTCCTGAACTGTGGGAAAAAGTGAAGGGCTTCAATATCCCGTCGGTGATTTTGGGTTCCCAAGCCCCGTCCCTTGTCGCGCCTGAGTCGAAGATTACCACCTTTGATGAATTGCTTGAGCTTGCCGGGTCCCCCACGGAACTTCCTGCAAGTAACGTCAAACAGAGCGATACGGCGGCTCTTCTGTATTCCTCGGGTACCACGGGGGTGAGTAAGGGTGTGATTCTTACGCATAAGAATTTCATATCCGCTTCTCTTATGGTGGGCGTGGATGACGAGCTGGCTAACGAGAGAGACGATGTCTTTCTTTGCGTTCTCCCGATGTTTCATATTTTCGGGCTTGCTATCATTGTATACTCGCAGCTTCAGAGGGGCAATGCAGTCGTGTCTATGAAGAAATTTGAGTTCGAGATGATGTTAAGGGCAGTTGAAAAGTATAGCGTGACTCGTTTGTGGGTTGTGCCTCCAATCATCCTTGCTCTGGCAAAGCAGAGCGTGGTGAAGAAGTATAATCTTTCGTCACTGAAGCAAATTGGTTCCGGAGCTGCTCCTCTGGGGAAAGAATTGATGGAAGAGTGTGGTAAAAATTTCCCTCAAGCTTTGGTTATGCAGGGCTATGGTATGACGGAAACTTGCGGCATTGTTTCTGTGGAGAATCCAAGAATGGGTATTCGTCATGGTGGTTCCGCAGGAATGCTTGTTTCAGGAGTTGAGGCTCAAATAATCAGCGTGGATACGCTGAAGCCCCTCCCTCCTCGTCAGTTGGGTGAGATATGGGTACGGGGTCCTAATATGATGCGAGGTTATTACAAGAATCCCCAGGCCACCAGCTTAACTATAGATAAACTGGGATGGGTGCATACTGGAGATCTGGGATATTTTGATGGGGAAGGGCAACTTTATGTTGTTGACCGTATCAAAGAACTCATCAAGTATAAAGGTTTTCAGATATCCTGA 1353 0.4893 MQRSGYGRDGIYRSLRPSPVFPRDENLSLVSFLFGNVASFPTKPALFDADSSQSLSFAQLKSLVVKVSHGFLRLGIKKNDVVLLFAPNTILYPVCFLGVTAVGAIASTANPIYTVAEIVKQVKDSNPKLVITVPELWEKVKGFNIPSVILGSQAPSLVAPESKITTFDELLELAGSPTELPASNVKQSDTAALLYSSGTTGVSKGVILTHKNFISASLMVGVDDELANERDDVFLCVLPMFHIFGLAIIVYSQLQRGNAVVSMKKFEFEMMLRAVEKYSVTRLWVVPPIILALAKQSVVKKYNLSSLKQIGSGAAPLGKELMEECGKNFPQALVMQGYGMTETCGIVSVENPRMGIRHGGSAGMLVSGVEAQIISVDTLKPLPPRQLGEIWVRGPNMMRGYYKNPQATSLTIDKLGWVHTGDLGYFDGEGQLYVVDRIKELIKYKGFQIS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4065g00020 450 Pfam AMP-binding enzyme 36 444 IPR000873 -
Pral4065g00020 450 Gene3D - 10 440 IPR042099 -
Pral4065g00020 450 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 449 - -
Pral4065g00020 450 FunFam Long-chain-fatty-acid--CoA ligase FadD 16 439 - -
Pral4065g00020 450 SUPERFAMILY Acetyl-CoA synthetase-like 19 450 - -
Pral4065g00020 450 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4065g00020 Pral-Chr4065 109497 112685 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4065g00020 1 450 Monolignol Biosynthesis Gene Families AT4G05160 66.372 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4065g00020 K01904 - qsa:O6P43_000369 701.049