Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4065g00019 ATGCAGAGATCTGGATATGGCCGTGATGGAATTTACAGGTCTCTCAGGCCCTCTCCCGTGTTTCCCAGGGACGAGAATCTCTCTCTCGTTTCATTTCTCTTTGGAAACGTCGCCTCTTTTCCCACCAAACCTGCCTTGTTTGACGCTGATTCCTCCCAATCTCTGTCCTTCGCTCAGCTCAAGTCCTTAGTAGTGAAAGTCTCCCATGGCTTTCTGCGCCTGGGCATCAAGAAAAACGATGTTGTCCTCTTGTTTGCGCCCAACACCATCCTCTACCCTGTCTGCTTCCTCGGGGTCACGGCGGTTGGCGCCATAGCCTCCACCGCCAACCCTATCTACACGGTCGCCGAGATTGTCAAGCAAGTGAAAGATTCCAATCCCAAGCTCGTAATTACTGTTCCTGAACTGTGGGAAAAAGTGAAGGGCTTCAATATCCCGTCGGTGATTTTGGGTTCCCAAGCCCCGTCCCTTGTCGCGCCTGAGTCGAAGATTACCACCTTTGATGAATTGCTTGAGCTTGCCGGGTCCCCCACGGAACTTCCTGCAAGTAACGTCAAACAGAGCGATACGGCGGCTCTTCTGTATTCCTCGGGTACCACGGGGGTGAGTAAGGGTGTGATTCTTACGCATAAGAATTTCATATCCGCTTCTCTTATGGTGGGCGTGGATGACGAGCTGGCTAACGAGAGAGACGATGTCTTTCTTTGCGTTCTCCCGATGTTTCATATTTTCGGGCTTGCTATCATTGTATACTCGCAGCTTCAGAGGGGCAATGCAGTCGTGTCTATGAAGAAATTTGAGTTCGAGATGATGTTAAGGGCAGTTGAAAAGTATAGCGTGACTCGTTTGTGGGTTGTGCCTCCAATCATCCTTGCTCTGGCAAAGCAGAGCGTGGTGAAGAAGTATAATCTTTCGTCACTGAAGCAAATTGGTTCCGGAGCTGCTCCTCTGGGGAAAGAATTGATGGAAGAGTGTGGTAAAAATTTCCCTCAAGCTTTGGTTATGCAGGGCTATGGTATGACGGAAACTTGCGGCATTGTTTCTGTGGAGAATCCAAGAATGGGTATTCGTCATGGTGGTTCCGCAGGAATGCTTGTTTCAGGAGTTGAGGCTCAAATAATCAGCGTGGATACGCTGAAGCCCCTCCCTCCTCGTCAGTTGGGTGAGATATGGGTACGGGGTCCTAATATGATGCGAGGTTATTACAAGAATCCCCAGGCCACCAGCTTAACTATAGATAAACTGGGATGGGTGCATACTGGAGATCTGGGATATTTTGATGGGGAAGGGCAACTTTATGTTGTTGACCGTATCAAAGAACTCATCAAGTATAAAGGTTTTCAGGTTGCGCCAGCAGAACTTGAAGGACTTCTTGTTTCTCACCCTGAGATATTGGATGCTGTTGTCATCCCATATCCTGATGCTGAGGCTGGTGAAGTCCCAGTTGCCTATGTTGTTCGTTCGCCCAATGGTTCTCTGACTGAAGAAGACGTTCAGAAGTTTATTGCTGATCAGGTTGCACCTTACAAAAGACTGCGAAGGGTGACATTCATCAACGCTGTTCCTAAGACGGCGTCTGGAAAAATTCTAAGAAGAGAGCTCATTGCGAAAGCACGATCCAAAATATGA 1629 0.485 MQRSGYGRDGIYRSLRPSPVFPRDENLSLVSFLFGNVASFPTKPALFDADSSQSLSFAQLKSLVVKVSHGFLRLGIKKNDVVLLFAPNTILYPVCFLGVTAVGAIASTANPIYTVAEIVKQVKDSNPKLVITVPELWEKVKGFNIPSVILGSQAPSLVAPESKITTFDELLELAGSPTELPASNVKQSDTAALLYSSGTTGVSKGVILTHKNFISASLMVGVDDELANERDDVFLCVLPMFHIFGLAIIVYSQLQRGNAVVSMKKFEFEMMLRAVEKYSVTRLWVVPPIILALAKQSVVKKYNLSSLKQIGSGAAPLGKELMEECGKNFPQALVMQGYGMTETCGIVSVENPRMGIRHGGSAGMLVSGVEAQIISVDTLKPLPPRQLGEIWVRGPNMMRGYYKNPQATSLTIDKLGWVHTGDLGYFDGEGQLYVVDRIKELIKYKGFQVAPAELEGLLVSHPEILDAVVIPYPDAEAGEVPVAYVVRSPNGSLTEEDVQKFIADQVAPYKRLRRVTFINAVPKTASGKILRRELIAKARSKI 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4065g00019 542 Gene3D - 10 439 IPR042099 -
Pral4065g00019 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 536 - -
Pral4065g00019 542 FunFam 4-coumarate--CoA ligase 2 440 541 - -
Pral4065g00019 542 CDD 4CL 21 534 - -
Pral4065g00019 542 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Pral4065g00019 542 Gene3D - 440 541 IPR045851 -
Pral4065g00019 542 FunFam Long-chain-fatty-acid--CoA ligase FadD 16 439 - -
Pral4065g00019 542 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Pral4065g00019 542 Pfam AMP-binding enzyme 36 444 IPR000873 -
Pral4065g00019 542 SUPERFAMILY Acetyl-CoA synthetase-like 19 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4065g00019 Pral-Chr4065 108814 112681 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4065g00019 1 542 Monolignol Biosynthesis Gene Families AT4G05160 68.750 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4065g00019 K01904 - qsa:O6P43_000369 858.596