Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4065g00004 ATGGCAGGTATTGAGGGGTTCCCAGGAAGCTCCATGCATGGGGTAACAGGCAGAGAGCAAACCTTTGTATCCTCGGTAGCTTCCCCGATGGTCCCAACTGATACAACTGCCAACTTCGCTCTCCCTGTAGATTCAGAGCATAAATCCAAGGTGTTCAGACCCTTGTCCTTAGCCAAACCCCACATGAGAACCTTCCATTTGTCTTGGATCTCCTTCTTCACTTGCTTCGTTTCAACCTTCGCAGCTGCTCCCCTGGTTCCCATAATACGGGACAACCTCAACCTCACAACGTACGACATCGGGAATGCCGGGGTTGCCTCTGTTTCAGGCAGCATCTTCTCAAGGCTGACGATGGGTGCAGTGTGTGACCTCATAGGCCCTCGCTATGGCTGCGCTTTTCTAATTATGATGTCAGCTCCTACTGTTTTCTGCATGTCGTTCGTGAAGGATGCTGCTGGGTACATAGCAGTGAGGTTTCTGATCGGCTTCTCCTTGGCGACATTTGTGTCGTGTCAGTACTGGATGAGTACGATGTTTAACAGTAAGATCGTGGGTTTGGCTAATGGGACGGCGGCTGGGTGGGGCAACATGGGAGGTGGGGCCACTCAGCTTATAATGCCGTTGGTGTACGAGGTGACCCGAAGAGCTGGGGCTACTCCTTTCACTGCCTGGAGAATTGCGTTCTTTGTTCCTGGTTGGTTGAATGTCATCATGGGACTCCTCGTCTTAACTCTTGGCCAGGACTTACCTGATGGAAACCTCTCTACCTTGCAGAAAAAGGGTGATGTTGCTAAGGACAAGTTCTCCAAGGTGCTGTGGTATGCCATAACAAATTACAGAACATGGATTTTTGTTCTTCTCTATGGCTACTCTATGGGAGTTGAATTAACCACTGACAACGTCATTGCTGAGTATTTCTACGACAGGTTCAATCTGAAGCTTCACACAGCTGGGGTCATCGCAGCAACATTTGGAATGGCCAACATCGTAGCTCGTCCCTTTGGTGGATATGCTTCAGACACAGCAGCTCGCATATTTGGCATGAGAGGGAGGCTTTGGGTCCTGTGGATTCTGCAGACCTTAGGAGGGGCCTTCTGTATATGGCTTGGCCGAGCTAATTCGCTACCCATTGCTGTGTTGGCTATGATTTTCTTCTCTATGGGAGCTCAAGCTGCCTGTGGTGCAACATTTGGTATAATCCCATTCATCTCAAGGAGGTCTCTGGGGATCATATCGGGTCTGACTGGGGCCGGGGGGAACTTCGGGTCGGGTTTGACCCAGTTGATTTTCTTTTCAACCTCCAACTTCTCTACCTCTACTGGTCTTTCCTTGATGGGTGTGATGATTGTGTGCTGTACACTTCCTGTGACTCTGGTTCACTTCCCACAATGGGGCAGCATGTTTCTTCCTCCTACCAAAGATGTTGATAAATCCACCGAAGAATATTATTATGCTTCTGAATGGAACGAGGAGGAGAAGCAGAAGGGATTGCATCAGCAGAGTCTCAAGTTCGCGGCCAACAGCCGATCTGAGAGAGGCAAGCGTGTGGCCTCTGCCCCAACACCACCGAATACAACTCCTTCCCATGTCTGA 1593 0.4997 MAGIEGFPGSSMHGVTGREQTFVSSVASPMVPTDTTANFALPVDSEHKSKVFRPLSLAKPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTTYDIGNAGVASVSGSIFSRLTMGAVCDLIGPRYGCAFLIMMSAPTVFCMSFVKDAAGYIAVRFLIGFSLATFVSCQYWMSTMFNSKIVGLANGTAAGWGNMGGGATQLIMPLVYEVTRRAGATPFTAWRIAFFVPGWLNVIMGLLVLTLGQDLPDGNLSTLQKKGDVAKDKFSKVLWYAITNYRTWIFVLLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGVIAATFGMANIVARPFGGYASDTAARIFGMRGRLWVLWILQTLGGAFCIWLGRANSLPIAVLAMIFFSMGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLIFFSTSNFSTSTGLSLMGVMIVCCTLPVTLVHFPQWGSMFLPPTKDVDKSTEEYYYASEWNEEEKQKGLHQQSLKFAANSRSERGKRVASAPTPPNTTPSHV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4065g00004 530 SUPERFAMILY MFS general substrate transporter 51 460 IPR036259 -
Pral4065g00004 530 MobiDBLite consensus disorder prediction 491 530 - -
Pral4065g00004 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Pral4065g00004 530 Gene3D MFS general substrate transporter like domains 57 254 IPR036259 -
Pral4065g00004 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 3 516 IPR044772 GO:0015112
Pral4065g00004 530 FunFam High affinity nitrate transporter 57 254 - -
Pral4065g00004 530 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Pral4065g00004 530 Gene3D MFS general substrate transporter like domains 264 466 IPR036259 -
Pral4065g00004 530 FunFam Nitrate transporter 2.1 265 466 - -
Pral4065g00004 530 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4065g00004 Pral-Chr4065 30868 32670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4065g00004 1 530 Inorganic Solute Cotransporters AT5G60770 79.434 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4065g00004 K02575 - gmx:100807710 976.852