Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4064g00104 ATGTCAGAACACAATAAAAGCCAAGCTGCAGTTCAGCTCGTAGCCCAGGCCGTTTACGGAAGCATGTCTAGTTTCACGGGCGTTTTCAAGGACGAAATAAAAAAGAATTTGGGTTTTTGCATAGTTGATGTAGATGCTGATTGGGACGGGGCATTTAATTTCACAAACGATCTGACATTTTTGACCTCATGTTCCCAGTCTCTAAAAGGAGATATTTCACAGCGCATATGCACAGCAGCAGAAATCAAACTATATGCCAGTGGTTTTGACATAAAGTCGAAGGGCCAGTCTAACAACTTGCAGCCCAACAAGAACTGTAACTTGAGCGTTTGGCTTAATGGGTGCGAACCTGGATGGGGCTGTAGTGCTGCTGAGAAAGTTCAACTTAATAATACTAAGGACATCCCTGTCAGGTCCACTGATTGTCAGCCTTGTTGTCCGGGTTTCTTTTGCCCTCGCGGCATTACTTGCATGATACCTTGCCCTTTAGGTGCTTACTGTCCACGTGGGCAGCTCAATCAAGCTACTGGAATATGTGAACCTTATCATTATCAGCTACCTGGAAAGAAAAACCACAGTTGTGGGGGAGCAGATGTTTGGGCAGACATTTCAACCAGTTGGGATGTTTTTTGTTCCGCCGGATCTTACTGTCCGTCCTCCATCCAAAAAAATCCTTGCACGCAGGGACATTATTGCAGGACGGGCTCAACCGATGAAGAAAGTTGTTTCAAATTGGCGAGTTGTAAGCCTCAATCGGCTAATCAAAATATAACTGCATATGGTGTCATGGTTTTTGCTGGGTTGAGCTTCTTGCTTATCATCATATATAATTGTTCTGACCAAGTTCTTGCAACCCGAGAAAGAAGAATAGCAAAATCAAGAGAAAGGGCTGCTGCAAGTGTAAGAGAAACACAAGCACGTGAAAAATGGAAATCGGCGAAAGATATTGCTAAGAAGCATGCAGTAGGACTGCAAACTTCTTTATCACGTACGTTTTCTCGTAGAAAATCTATGAAGGGGGATCTGAAAGCTTTTGGTTCTAAATCTGCGTCAGAAACTCCCTTGCCACCTGCGCCACCAGCAAGTGCTGGTACATCATCGAAAGGAAACAAAAAAGATAAAAACAGCCTCACAAAAATGATCCAGAAAATTGAGGAAGACCCTGATAGTCAGGAAGGCTTTAATGTTGAGATAGGAGATAAAAATATCAAAAAGCAAGCACCCAAAGGCAAGCAGTTGCATACGCAAAGCCAAATTTTTAAGTATGCGTATGGTCAGATTGAAAAAGAAAAGGCTTTACAGGAACAAAATAAGAACCTTACCTTCTCTGGAGTTATTTCAATGGCTAGTGATATTGAGATCCGGAAGAGGCCTACGATTCAGGTTGCTTTCAAAGACTTAACTCTCACTTTGAATGCGAAAAACAAGCATCTTCTAAGATGTGTGACTGGGGAACTACATCCTGGTCGAGTTTCAGCAGTCATGGGCCCATCTGGGGCTGGTAAAACAACATTTCTTTCTGCTTTAACTGGAAAAGCAACCGGATGTCATACAACTGGCTTAGTTCTTATAAATGGCAAGGTTGAATCTATTCGGTCATACAAGAAGATCATTGGGTTTGTGCCACAAGATGATATTGTGCATGGCAATTTGACAGTAGAAGAGAATCTGTGGTTCAGTGCCAGATGCAGACTTTCAGCTGATTTACCAAAAGCAGAGAAGGTTCTAGTCGTTGAGAGAGTTATTGAGTCATTAGGTCTGCAAGCAATCCGAGATTCTCTGGTTGGAACGGTGGAGAGGCGTGGAATCTCTGGAGGTCAAAGAAAACGAGTGAATGTAGGGCTGGAAATGGTTATGGAACCTTCACTCCTGATTCTAGATGAACCAACATCTGGTTTAGATAGTTCATCTTCTCAGTTATTGCTTCGAGCACTAAGGCGAGAGGCTCTAGAGGGTGTTAATATATGCATGGTCCTTCACCAACCAAGTTACACACTGTTCAAGATGTTTGATGATTTTATACTACTCGCTAAAGGTGGTCTTATAGTGTATCATGGACCAGTGAAGAAAGTTGAAGAGTATTTTTCCAGCTTGGGGATTGTTGTTCCTGATCGCGTTAATCCTCCAGATTATTACATAGACATTTTAGAAGGGATAGTAAAACCAAGCTCAAGCACAGCAGTAAACTATAAACAACTACCTGTTAGATGGATGCTTCATAATGGGTATCCTGTTCCTTTGGACCTGCTTCAGGGTGTCGAAGGGATGGAAGGCACAAGTGGTGAAAGTTCCACACATGGGGCAGCTACTCCAGCAGCAGAAGCCGAAGATCCGTCTTTAGCTGGGGAAATTTGGCAGGATGTAAAAGTCAATGTTGAGAAGCAGAAAGACTTCTTTCGATATACTTTCTTTACTTCAAATGATTTATCTAATCGGGTAACCCCTGGAGTCTTCCAACAATACAGATACTTTCTTGGAAGGTCTGGTAAGCAGCGGCTACGAGAGGCTAGAACACAGGCCGTAGATTTTCTAATTTTGTTACTTGCTGGAATATGCTTAGGAACACTTGCCAAAGTGAGTGATGAAACATTTGGAGCAACTGGTTACACATATACTGTCATAGCAGTATCACTCCTTTGCAAGATCGCGGCTTTGAGAACATTTTCACTGGATAAGTTGCACTACTGGAGAGAGAGTGCATCTGGCATGAGTAGCCTGGCTTACTTTCTTGCAAAGGATACAGTTGATCATTTTAATACACTCATAAAGCCGGTGGTCTATCTCTCAATGTTCTATTTCTTCAACAATCCTAGATCCTCTGTCGTAGATAACTACTTTGTTTTGCTGTGCTTGGTGTACTGTGTCACTGGCATAGCTTATATATTGGCGATCTCACTTGAACCTGGTCCTGCCCAATTGTGGTCGGTGTTACTTCCAGTAGTTTTGACACTTGTAGCAACCAGTGATAGTGTAGCTGAGAGCTCATTTATGGGCAAGGTAGCTGACGTTTGCTACGCAAAGTGGGCTCTTGAAGCATTTGTGATATCAAACGCTAAAAGATATGCTGGGGTTTGGTTAATAACCCGATGCGGTGCACTAAATCTCCGTGGCTATGATCTCAACAACTGGTATCAATGTCTCATTTTTCTTGTGGTAACGGGAGTACTTAGTCGCATTGTGGCATTCTTTTGTATGATCACTCTCCAGAAGAAATGA 3216 0.4263 MSEHNKSQAAVQLVAQAVYGSMSSFTGVFKDEIKKNLGFCIVDVDADWDGAFNFTNDLTFLTSCSQSLKGDISQRICTAAEIKLYASGFDIKSKGQSNNLQPNKNCNLSVWLNGCEPGWGCSAAEKVQLNNTKDIPVRSTDCQPCCPGFFCPRGITCMIPCPLGAYCPRGQLNQATGICEPYHYQLPAXKKNHSCGGADVWADISTSWDVFCSAGSYCPSSIQKNPCTQGHYCRTGSTDEESCFKLASCKPQSANQNITAYGVMVFAGLSFLLIIIYNCSDQVLATRERRIAKSRERAAASVRETQAREKWKSAKDIAKKHAVGLQTSLSRTFSRRKSMKGDLKAFGSKSASETPLPPAPPASAGTSSKGNKKDKNSLTKMIQKIEEDPDSQEGFNVEIGDKNIKKQAPKGKQLHTQSQIFKYAYGQIEKEKALQEQNKNLTFSGVISMASDIEIRKRPTIQVAFKDLTLTLNAKNKHLLRCVTGELHPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGLVLINGKVESIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKAEKVLVVERVIESLGLQAIRDSLVGTVERRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFKMFDDFILLAKGGLIVYHGPVKKVEEYFSSLGIVVPDRVNPPDYYIDILEGIVKPSSSTAVNYKQLPVRWMLHNGYPVPLDLLQGVEGMEGTSGESSTHGAATPAAEAEDPSLAGEIWQDVKVNVEKQKDFFRYTFFTSNDLSNRVTPGVFQQYRYFLGRSGKQRLREARTQAVDFLILLLAGICLGTLAKVSDETFGATGYTYTVIAVSLLCKIAALRTFSLDKLHYWRESASGMSSLAYFLAKDTVDHFNTLIKPVVYLSMFYFFNNPRSSVVDNYFVLLCLVYCVTGIAYILAISLEPGPAQLWSVLLPVVLTLVATSDSVAESSFMGKVADVCYAKWALEAFVISNAKRYAGVWLITRCGALNLRGYDLNNWYQCLIFLVVTGVLSRIVAFFCMITLQKK 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4064g00104 1072 ProSitePatterns ABC transporters family signature. 604 618 IPR017871 GO:0005524|GO:0016887
Pral4064g00104 1072 FunFam ABC transporter G family member 24 457 699 - -
Pral4064g00104 1072 CDD ABCG_EPDR 461 687 - -
Pral4064g00104 1072 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 463 705 IPR003439 GO:0005524
Pral4064g00104 1072 Gene3D - 452 700 IPR027417 -
Pral4064g00104 1072 Pfam ABC-2 type transporter 661 1072 IPR043926 GO:0140359
Pral4064g00104 1072 MobiDBLite consensus disorder prediction 340 396 - -
Pral4064g00104 1072 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 214 1060 - -
Pral4064g00104 1072 Pfam ABC transporter 483 632 IPR003439 GO:0005524
Pral4064g00104 1072 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 464 701 IPR027417 -
Pral4064g00104 1072 SMART AAA_5 489 690 IPR003593 GO:0016887
Pral4064g00104 1072 MobiDBLite consensus disorder prediction 373 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4064g00104 Pral-Chr4064 517942 523896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4064g00104 490 693 Calmodulin-binding Proteins AT2G36910 27.803 8.48e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4064g00104 - - gmx:100794093 1685.62