Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4064g00100 ATGAGTAACAGACGACCTGAACCGCATGTTGCGCAACAAATTCGGCGTGACAGGTTGAGAATCCAGAATAGCTCCCAGCATTCAGAAGGTTTCCCAAGCAATCTTGAACGATTATCTTTACGACCAGGGATCAGTTCTGATCTTCTTCAAGTTAGGAGTGTGAGGAATGCGAATATGCTTTACGAACCTGCTTTCTATTCATCGGAGATGGTCAATTTTTCATCGGTTTCGAATCCTTTAGCTGAATCCGGTAGGCTGATGACGATGCCTCAGCTTGCTTCATTCCCCTATTCATCAAACCCCGCTTCGTCCAGCTTTCATTCTTCTCTCGAAGAGCAATGCGAAGTACGTAACTTAGGCTATTGGAGAAACATTGGGTCACACCAAGTCTATGATTGGATGCCTAACTATGCCTCTAGTTCGGCGACTGACGAAAGCAATCCTAATCCTAATTCCACTTTTGGCGTAGCAATCAATAATGAACTCACAGGTGTACAGTCTTCCTCTCTGAACAATCCGTCAGATGAAACGGCGAGCCGGGAAAGCCAACGGCAATTAGGGGAGATTCATCCAAACTTTATGCGGGATGTAGTCAAGTCAGCTTCTATCAGTGGGCAAGGGTCAGAAATGGCTTCAATAATGCAAGAAAGTGGCCATGGAATGTGGGTGGGAAACGGAAATCAACTTTTTCTTCCAAACTATGGAATCCAATCAAATCAGTTGCGTCTTGGAAATCCTAATTCTTGCACTAATCGAACGATCGATAGTTCTCTCGGTTGCAAAGATATTGATGAATGCTCGGGTCGTCCAGTGTCCGACTCCAATAATCAGGGCTTATCTTTATCGCTCTCATCGAATTCACAGTCTGCGCATTGCAGATCGGATGACCACCAATCGCGGTGTGTGGTATCTAAGGATCCTTCATGCCCAAAACCTTTGAGATCTGTTTTAAATCCCTCTTCCAATGCTGGAGACCGTGTCAAATCGATTCAAAACATGGTGGTGGGAACACCTTCGAACATTGATTATCGAAATGTGGGGCCTCTCGGCCCTTTCACGGGGTATGCTACCATATTGAAGAATTCAAATTTCTTAAAGCCAGCGCAACAGTTGTTAGAAGAAATCTGTGGTCAATCCCGTGAAAAACTTACGAAAGGACATGATGTTTCTGGGAGGGTTTCTGGAGAAGCTGGCGCTTCCACTTCTGCTGACGCTGTCAATGCAACAAATGAAAGTGATGTTGGTGGAACCAGGAGTAGCTCTCACCCTTCTCGGCCAGAGTATCAGCAAAGAATGGCTAAGTTTCTGTACATGCAAGAGGAGGTTATAAGAAGGTACAAGCAACATCAGCAGCAAATGGAAATGGTTGTTTCATCCTTTGCGTCAGTTGCGGGTCTTAGTTCTGCTACTCCTTACATCTCCAAGGCTCTCAAGTCAGTATCAAAGCACTTCAGAGGCCTAGAAAATGCTATCTCCGATCAAGTTAAGCATATAAGAGAAGTTTTGGGAGAGGAATTATGTGCACCTACCGGTGGTGGTACTGTTACTTCTACCAGTGGCCAACTTGACAGCAATATGGCGCGACTCAAGTTCTTGGACCAAAGCTTTCAAAAGAACAAATTCATTGTGGGCGGCACAGGCTACGTGGAACACCAGCAGCATGCCTGGAGGCCCCAGCAGAAAGGCTTACCAGAGCGTGCGGTGTCAATTCTTAGGGCTTGGTTGTTTGATCATTTTCTTCACCCGTACCCCACGGACGCTGATAAACACATGCTAGCTGCTCGAACAGGTATCAAACTGGTTCATAAACGCCCGAGTACGTGTCTGGAAGCCAATGGTAGAGGAAATACACATGCTTGA 1860 0.4586 MSNRRPEPHVAQQIRRDRLRIQNSSQHSEGFPSNLERLSLRPGISSDLLQVRSVRNANMLYEPAFYSSEMVNFSSVSNPLAESGRLMTMPQLASFPYSSNPASSSFHSSLEEQCEVRNLGYWRNIGSHQVYDWMPNYASSSATDESNPNPNSTFGVAINNELTGVQSSSLNNPSDETASRESQRQLGEIHPNFMRDVVKSASISGQGSEMASIMQESGHGMWVGNGNQLFLPNYGIQSNQLRLGNPNSCTNRTIDSSLGCKDIDECSGRPVSDSNNQGLSLSLSSNSQSAHCRSDDHQSRCVVSKDPSCPKPLRSVLNPSSNAGDRVKSIQNMVVGTPSNIDYRNVGPLGPFTGYATILKNSNFLKPAQQLLEEICGQSREKLTKGHDVSGRVSGEAGASTSADAVNATNESDVGGTRSSSHPSRPEYQQRMAKFLYMQEEVIRRYKQHQQQMEMVVSSFASVAGLSSATPYISKALKSVSKHFRGLENAISDQVKHIREVLGEELCAPTGGGTVTSTSGQLDSNMARLKFLDQSFQKNKFIVGGTGYVEHQQHAWRPQQKGLPERAVSILRAWLFDHFLHPYPTDADKHMLAARTGIKLVHKRPSTCLEANGRGNTHA 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4064g00100 619 MobiDBLite consensus disorder prediction 269 292 - -
Pral4064g00100 619 MobiDBLite consensus disorder prediction 395 427 - -
Pral4064g00100 619 Pfam Homeobox KN domain 574 599 IPR008422 GO:0003677|GO:0006355
Pral4064g00100 619 SMART prehox3 353 493 IPR006563 -
Pral4064g00100 619 Gene3D - 563 602 - -
Pral4064g00100 619 MobiDBLite consensus disorder prediction 386 427 - -
Pral4064g00100 619 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 203 599 - -
Pral4064g00100 619 MobiDBLite consensus disorder prediction 269 295 - -
Pral4064g00100 619 Pfam Associated with HOX 358 492 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4064g00100 Pral-Chr4064 484667 489209 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4064g00100 335 582 Homeobox Transcription Factor Family AT2G27990 40.637 1.09e-48 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4064g00100 - - pcin:129312762 917.531