Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4064g00096 ATGATTTATCTCTGGTTCATTGCCTTACTATGCATTAGTTCAAGTTCAGCTCAGCAATTCTACGACCCTAAAAATTGTTCTACAGAACCTGACACCTACCCAGGTTCGAGGTACACTTGTAAAACTCCCCAGCATCCATGCGAAACATACTTGGTGTTCAGATCGAACCAGCATTTTCAGAACATTTCAGAGATCTCAAAGCTCTTCCACATGAACCCTGACACACTGCTTCAAGAAAATAACCACCTCAATTCTTCTTCTCAGTTCCTTGAAGCAGGCAGAGAGGTTCTTATTCCTGTCTCTTGTTCCTGCTCTGGTGGTTTCTATCAAGTTATTTTCAGGTATGTAGTCCCGGAAAATACAACATTTTCAGAGATTGCTTGTGGAGTTTATGAAGGGCTGCTCAAATCTTTCACACTCGAACGGGCCAACCTCAATACGACAATAGCTGGTGCTGAGCTTAATGTTCCTCTTCGATGCTCATGCCCTGATGATTCCGCCAGTATTGGCAAGAAGGTGAACTACCTTGTGACATACCCCATAATACAGGGAGATTCAGATAGTGACATAAGGGCGAAATTCGGCATCTCAGAAGAAGATTTCTTAGAAGCCAATGACTTGCATCAATTTTCAACTCTTTTCCCACAAACAACTGTTTTGATCCCAGTAAGAGATGATTCAATCAAGATTACTGATATTCCAGAGTCGTCTCCAGCTCCAATTTCTGGTTTTCTTCCAACAATTCCAGTGGCAAAAACACACAGGGTCAAAAGCCCCACCAGTTTGTACATCGCAGCTTGTGTCATAGGATTTTCGCTATTAATCATGGCAATCCTTGTGAGCATATTGTATATTAAGGTCTTAAGGAAATGGAAGAGCGAAAGTGTTCAACCTTTCACTCCTTCGACCTCCGTCGTCATGTCACCAACGAGAGGCTCTTCAACAACTTCGTGTCTTTCTCCGGATCTTCTCGCCGGAATAAAGTACTGTTTGGTCAATTACAGCATAGAAGAGCTCAAAATGGCCACAAAGGATTTCAGTGAAGAAACCAAGAAAAGTGACTCAGTCTATAAGGGGTTAATTACTAATCTTGAGGTGATGATCAAGAGGATGAGATTCGAAGACACACGTCGGGTAATTGATTTACATTCTAAGATCAACCACATCAATATTGTGAACTTGCTTGGTGTTTGTTATGATGAAAGTGATTTGTCATGGTCATATTTGGTTTTTGAATGGCCTAAAAATGGGTGCTTAAGGGACTGTTTATCTGATGGATCCAACGTCCTCTGTTGGAAACAAAGGACACAAATAGCTTTTGATATAGCCACAGTTCTTCACTATTTACACTGCTGCGCTTTTCCTTCTTACGCTCATTTAAATGTTAGCAGTAGAAATATATTTGTCACAGAAGACTTCAGAGGGAAACTAGCAGATATTGCTGCACCAGAGAGCCTTAGGAGCGGCGCTGTTTCTGAGAAAGTAGACATTTTTGCATTTGGGATTGTGTTACTTGAACTGATCTCTGCAAGAGAGAACACTGAAGGGAAATTAGCGAAAGATTCTATTGGGTTTTTGGGGGGAGGAGGAGGAGGCAGTGAAGGGGGTTGCTTTGAAGGGTTGAGGAATTTCATGGATCCTAATCTGAAAGATTATCATCTTGCAGAGGCTCTGTGTTTGGCTGTTTTAGCAAAGGCTTGTGTAGCTGATGATCCCTTGCATAGACCAACCATGGATGATATCATGAAGGTCCTTGCAAAAATGGCTTCTCCACAATAA 1779 0.4177 MIYLWFIALLCISSSSAQQFYDPKNCSTEPDTYPGSRYTCKTPQHPCETYLVFRSNQHFQNISEISKLFHMNPDTLLQENNHLNSSSQFLEAGREVLIPVSCSCSGGFYQVIFRYVVPENTTFSEIACGVYEGLLKSFTLERANLNTTIAGAELNVPLRCSCPDDSASIGKKVNYLVTYPIIQGDSDSDIRAKFGISEEDFLEANDLHQFSTLFPQTTVLIPVRDDSIKITDIPESSPAPISGFLPTIPVAKTHRVKSPTSLYIAACVIGFSLLIMAILVSILYIKVLRKWKSESVQPFTPSTSVVMSPTRGSSTTSCLSPDLLAGIKYCLVNYSIEELKMATKDFSEETKKSDSVYKGLITNLEVMIKRMRFEDTRRVIDLHSKINHINIVNLLGVCYDESDLSWSYLVFEWPKNGCLRDCLSDGSNVLCWKQRTQIAFDIATVLHYLHCCAFPSYAHLNVSSRNIFVTEDFRGKLADIAAPESLRSGAVSEKVDIFAFGIVLLELISARENTEGKLAKDSIGFLGGGGGGSEGGCFEGLRNFMDPNLKDYHLAEALCLAVLAKACVADDPLHRPTMDDIMKVLAKMASPQ 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4064g00096 592 Pfam Protein tyrosine and serine/threonine kinase 373 480 IPR001245 GO:0004672|GO:0006468
Pral4064g00096 592 Gene3D Transferase(Phosphotransferase) domain 1 481 592 - -
Pral4064g00096 592 ProSiteProfiles LysM domain profile. 177 221 IPR018392 -
Pral4064g00096 592 Gene3D Transferase(Phosphotransferase) domain 1 415 480 - -
Pral4064g00096 592 SMART LysM_2 178 222 IPR018392 -
Pral4064g00096 592 SMART LysM_2 50 99 IPR018392 -
Pral4064g00096 592 SUPERFAMILY Protein kinase-like (PK-like) 337 585 IPR011009 -
Pral4064g00096 592 Gene3D Phosphorylase Kinase; domain 1 317 413 - -
Pral4064g00096 592 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 4 590 - -
Pral4064g00096 592 Pfam LysM domain 182 222 IPR018392 -
Pral4064g00096 592 ProSiteProfiles Protein kinase domain profile. 303 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4064g00096 Pral-Chr4064 445286 447098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4064g00096 4 588 Receptor kinase-like Gene Family AT2G23770 30.583 2.49e-67 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral4064g00096 PK_Tyr_Ser-Thr 1.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4064g00096 - - rcn:112201552 655.595