Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4064g00093 ATGCGGTGGATGCTACCATCTTTCTTGTCTCGAACCTCCCATGGTGGATGCTCCCCTTGGAGTTTGGCACTGTCACCTTTGCTTGAAGAAGAGATAGAATTTGGTGTATATTCTGTGTCCGAGGGAGTAGAATCAATTTGGGATGTCAGGGAAGTCAAGGTGTTTCGTGCTAATGGATGGACAACTGAGAAACATTTTCTCGTGAAGTATAAAGGCCTTGCTCATGTTCACAACCGTTGGGTACCAGAAAGTCAGTTACTTCTTGAAGCTCCTCCATTGCTGTTTGAGAAATTTAATCAGAAAGATCAGGCCCTAAAGTGGAAGCCAGAATGGAGCTTACCTCACCGGTTGCTTCAGAAGAGAGCATTAATCTTTGCCCAACAGGATGGTGATCCCAGTAGCGGCCAGGCTATTGGTAATTCTGACTGTCATTATGAATGGCTTGTTAAATGGCATGGTCTTGGTTATGAACATGCATCATGGGAGCTGGACGACGCTTTGTTTCTTCATTCACTTGAAGGTCGGAGGCTGATTAAAGACTATGAAGATCGTCACCAGAGGGCAAAGAGAGTTCCTTTATCATCCAAAGTTGATAAGAAACTAGACCGCATTACTTCTTTTAGCAAATTATCTCAGACACCTGGTGGATTTCCACCTGGATTTGGTATCAACAATTTGGATGCAGTTAACAAGCTGCGTGAGCATTGGCACAAGGGTCAGAATGCTGTTGTATTTGATGACCATGACAGAATGGTGAAAATGGTTGCATTCATCTCATCTCTGGTCTCTAATACATGTCGACCTTTTCTCATTATCTCAACTTCTGCTGCTCTCCATTTATGGGAGTATGAGTTTTCTTGTTGGGCCCCATCTCTCAATGTTGTTATTTACAGTGGAAACAAAGAGATTCGTAGAAGCATTAGGAAACTAGAATTTTATGGGGAAGGTGGCTGTCTGCTTTTCCAAGTGCTTATAGTACTTCCAGAGATCATCATTGAGGATCTAGAGGTTTTGGAAGGCTTAGAATTTGAAGCAATCATAATTGATGAGTCCCAGTGCTCAAAGATCTCATCTTATTTGAAGCAAATTAAAATGTTAAAGACAGATTTCTGGATTCTTCTATTCAGCGGCCAACTAAAGGATAGTGTTGTAGAATATCAAGATATCCTGGCTTTTCTTGATCACCAGAGTTACAATGAAGATAATGGTGATTTAATCTCGAATTCCAGTGATATTGGTCAACTAAAGGATAAGCTGTCAAGTTTTGTTGCATATAGATGCAACTCTGACTCCTTTAGGTTTGTTGAGTATTGGGTTCCTGTAAATATCTCCGATGTGCAACTTGAGCAGTATTGTGCTGCTTTACTTTCAAACTCTTCAATACTACGCTCACAATCAAAATCTCATGTCACTGGGGCACTTCATGACATTCTTACGACTACCCGGAAGTGTTGTAATCACCCCTATCTTGTTGATGAATCCCTACAAAGTTTACTTATCAAAGATCTTCCACCGGCTGAGATCCTGGATGTTGGAGTAAAAGCAAGTGGGAAGCTGCAACTTCTTGATTCCATGCTCATGGAATTGAAAAAACAAGGTCTGAGGGTGCTTATTCTTTTCCAGTTCCTAGGTGGTTCTGGGAGGGTTTCAATTGGAGATATTTTGGATGACTTGATACGTCAAAGATTTGGTCCCGATTCATATGAAAGAATTGACAAGGGTGTTTTGAATTCTAAGAAGCAAAGTGCTCTGAAAATGTTTAATAACAAGGAGCATGGGAGATTTGTACTTTTATTAGAGACAAATGCTTGCCATCATAGCATCAAATTGTCATCAGTTGATACCATTATCATTTTTGATAGTGATTGGAACCCATTGAATGATATAAGGTCCCTTCAGAAAGTAGCACTTGATTCACAGTTGGAGCATGTTAAAATATTTCGCTTGTATTCGTCTTTCACTGTTGAAGAAAGAGCCCTAGTCCTTGCTAAGCAGGATAGACCGCTTGATAGCAAATTGGACCTAAGTTGGAGTACTAGTCACACGCTGTTGATGTGGGGCGCATCATCTTTATTTGATGATTTAAAAGCTTTTCATGATGGTAAAACTGATATCTTAAGTGTGAACTCCTCATCTGCACAATTATCTTTGAAACAAGCTCTACATGAATTCTTATCCATACTTAAGCAAAATGGTGAAGATACTGACACAAGGGACTGCTCATTTTTATTGAAAGTCAAGCAAAATGGATTAAAATACTACCCAAATTTTTCTTTGCTTGGTGAGTGGAAATTTAAGTCACTGGATTCAGAGCCATACCACTTATTTTGGACAAAAGTTTTGGAGGGCAAAAATCCACAATGGAAATACTCATGCGGTTTATCTCAAAGGAGCCGGAAAAGGGCTCAGCATATGGATGGTTTGGGAAAGAGGTCTGACTTTGAGAATGAAGAGGTAGTGAAAAAGCGCACAAAATTTATAAATAATGCTGATCAGCCTTATTCAAAACGTGAAGGTGAAAAATTATCCGCTGGAAACAAGGAAGAAAGACCTCAAGGCAATGATGTTGAATTCCTGAAAGCAAGGAAATCACGTGATGAGCAGAGGAGCTTACATCTTTCTCTGAAGTCAGAAATAGCTAAGCTTTGTGGAATCCTTGATGTCCCAGATAATGTCAAGAGGATGGCTGATGAATTTCTTGATTATGTCATGAACAACCACCATGTGAATAGTACTCTTCCAAAGTCAATATTGGAGGCTTTTCAAATTGCTCTGTGCTGGGCCGCAGCTGCTTTGGCAAAGCACAAGATTGACCATGAAGCTTCCCTTATGCTTGCAAAACAGCATCTAAAATTTGATTGTAGGAAGGATGAGGCAAATGTAATTTATTCAATGTTGCGGTGTCTGAAGAATATATTTTTGCATCGAACAGGAAATTACAATGTCACTGGCTCTCCAAAAGCTTCTGCATCTGGATTATCTGATAAGAATTATTCCTGTACGGGCTTGGCACTAGAAGCTGAATTGGCTAAGAAAGATGTCTTAAAAAGCATTAAAGAAATTCAAAAGAAATGCCAAAAGAAGCTGAGGAAGTTACTCTTTAAGCATCAAGAAGAAAAGAACAAGTTGGATGCAACATATGAGGAAAAAAGGGCCGATCTTGAGAAAAAGTACAAAATAGAATCAGCTGTTATTCGGTCCCGTTCTCCTAATGATGTGATCAGATCAGAAAACCTCAAGAATTTAGATATTGAATATAATGAAAGAATTGAAGATCTGAAGCATCAGTACGAAATGCATCTCAAAGATCTTGAGAATGTCCAATCGACAGCAAGGCAAATGTTACAGAATAGGGAGGTCGCTTGGGTGGAAGATGTGAAGTCTTGGGCACAAGATGAATTGTTAAACGCACTTCCTTCAAAAGAACATGGGAATGGGATAGAATACTTGAAGACTAGCATGCAAGCTGAGCCTGACTATGATCCCAAGAATAGGTGCCTTGTGTCCAATCTTGTTACTAAGGATACTAATTTTGATAGAACAGTTGAAGCCATGATAGGGACTCGTCTTGGATCATCTAGAACTCCTGAAATCATGTCCCCTATGCTTGTACAGTGCGGTGATCCAGTTGATGGGCAAACTCCTCCGGTTGAGGCTGCTAGTGCTTATGAGGGCCATGATAGAGCTCAAAACGTATGTGATAGTCAAGGGAAAATTATCTCCGTGCCTGCCCATCCAAAAGAACATAATGTCAATGGAGCCACACGCATGATGAACGAAGGGGAAGGACATAATATTTTCTATGATGGTTGCGGGGAAAAAACTGTGCCTGATGGCTCAGAGAAGGATACAGCCGTGGATCCTTCTTCATCCAGGGAACTAATTCCTGATAGAAGTCCATTGAATGTTTCAGATAGAGAGTTATCATCAAGACAATGTGAAAGTCCACCGTTGCCAGATCAGCAAACTTCTCTTGAAGTCTCATTATGCATACGTGATGGACAGGTCCCAATTGAAGTGCCTGAAACTAGTTGTGGAATAGCTGAAGGTAATAAGGGCGGAGAGCACCAAAGAGATGGGGTATTGTTGGATCAAACTGCCACATCAGAGGAGCGGGAACAGATGTCAAGAACCATGAACAATAACACTTTGTCCCAGGCACTACAAGATTCACCTGCCTCTTTATTAACATCCCCCAGAATGGTTGATAAAGATGCAACGGTGGGAGAAATACAGAATTCTTCGGGACTGGTTGAACAGTTATCTAATCCAGCTGATATTATTCCAGCTAATCAATGTAATCTGCAGTCAGTCGTGGAGCCTCTAGAGCAGGTGCAGGAATTACCATCTGCAGAGTGCCTTGCTTCCAACCAGGATACAGCTGGAGAAATGCAGATCTTTGCTCCGCAAGTTGAGCCTGTCTCTAGTCCTGTTGATGCTTTACCAGCTGGTCAATTTAATCATGACCCAGCCATGGAGCCTCTAGAGCAACTACAGCAATTACCTTCTGCAGCGGCCCCTGCTGCTAACCTGGACACTTCTGGAGAGTTGCTTAACTCTTCCCAGCAAGTTGAGCCAGTCTGTCGACAGGATAATGGGGCACAAGCCAATGGATTGAATCATGAGTCACGGGTCAGGGAGCTTCTACAGCAGATGCAGCAACTTCCGCCTGCTGTCCCTCCTAATTCCACCCACAATCCATCAGTGGCAACTGAAACTGAACTCCGGTCAAATAATGAAGATTCTCTGTGTGGCCAGGTTTCCCCTGCACCAATGGAGGTTACAAATCAGGCTGTCGTTCATTCTGCCTCTGAACTTGATTCACACACACCTGTTGGTACATGCAGAACGCAATCATTAGGCACTAGAAATGTGTTCACTCCTCCAGAGATCAATAACCGTCCTAGACAAACTACAAGCCAATCAGCAGACACGGATCCGTTAAAGAATGAATTGGACAGATTACTAAGAGAGTCAGAGCAAACCTTGAAATACTATGAAGATATGAAATTGCAGTTGAAATCTGATTGTGAGAGAGAGCTGGAGGAAACTCGCAGGAAGTATGACGTCAAGTTACAGGAGAGAGAGCTTGAGTTTCATCTGAAAAAGAAGAACCTGGAAACAAATATCAACTTAGTTCTCATGAATAAGATGTGGGCAGAGGCTTTTAGGTCCAAATGCATGGATCTTAGAGTATCCGGACCACAAGGAATGCAGCAAGATCCAAGTTTGGCACAGCAATTGGTTTGGACTTCAAGCCAGCAAAGAGATGTGAGGCCTTCCCAAGCAGCAAGTCCACCTCATGGGCCTCCTGCATCTACACTGCAGCATTTGGCCGCTGCTTCTAGCCCTCAAACCATGGCGCCACCTCCCCCTGTATCCAGTATGCGGACCTTCCCTCTAGGGAGCTCACAGATTTTGGTGCCACCCATGCCTGCTACGGCTAGCTCTTCACCCATGGTGCCACTTATATCTACTATAACTAGCTCGCAGAACATGGCACCCCCTCTAGTGGCTGCTTACAATGCACCTCCAAGGCCACCTCACATCAACTCCATTCCTCCGTTGGCAAACCATCAAGCTGGTAGTGGGTTCCGTACCACTCCTCCCCATCTCCAGCCTTATAGACCACCAACATCTGGCGTGTTGAGTCAACAAGCTCCTAGTAACAATCCTGCAATGCCCTCATTGCCTAACCATGCTCGACCAACACTTCCAACCAATACATCTGATCCTCATAATAGAGTGCAACGGCCTGAAATTCCTGTAAGGTTACCCATTCCTAACTTCTCAGCCAGGGAGCCAGCGATGGGTGGTAATTCTCAACTGGGTATGAATCTGTCAAATACTCTGTTACGTCCATCAAATGTGACATCATTGCAGCAATCTAAGTTTGGCACCGCTAGTAGCATGCGGGATGACTGTGTCCGTCCAGCTATGTCACCCAACGTAGTCTGTTTGTCAGACGATGACTAA 5976 0.4274 MRWMLPSFLSRTSHGGCSPWSLALSPLLEEEIEFGVYSVSEGVESIWDVREVKVFRANGWTTEKHFLVKYKGLAHVHNRWVPESQLLLEAPPLLFEKFNQKDQALKWKPEWSLPHRLLQKRALIFAQQDGDPSSGQAIGNSDCHYEWLVKWHGLGYEHASWELDDALFLHSLEGRRLIKDYEDRHQRAKRVPLSSKVDKKLDRITSFSKLSQTPGGFPPGFGINNLDAVNKLREHWHKGQNAVVFDDHDRMVKMVAFISSLVSNTCRPFLIISTSAALHLWEYEFSCWAPSLNVVIYSGNKEIRRSIRKLEFYGEGGCLLFQVLIVLPEIIIEDLEVLEGLEFEAIIIDESQCSKISSYLKQIKMLKTDFWILLFSGQLKDSVVEYQDILAFLDHQSYNEDNGDLISNSSDIGQLKDKLSSFVAYRCNSDSFRFVEYWVPVNISDVQLEQYCAALLSNSSILRSQSKSHVTGALHDILTTTRKCCNHPYLVDESLQSLLIKDLPPAEILDVGVKASGKLQLLDSMLMELKKQGLRVLILFQFLGGSGRVSIGDILDDLIRQRFGPDSYERIDKGVLNSKKQSALKMFNNKEHGRFVLLLETNACHHSIKLSSVDTIIIFDSDWNPLNDIRSLQKVALDSQLEHVKIFRLYSSFTVEERALVLAKQDRPLDSKLDLSWSTSHTLLMWGASSLFDDLKAFHDGKTDILSVNSSSAQLSLKQALHEFLSILKQNGEDTDTRDCSFLLKVKQNGLKYYPNFSLLGEWKFKSLDSEPYHLFWTKVLEGKNPQWKYSCGLSQRSRKRAQHMDGLGKRSDFENEEVVKKRTKFINNADQPYSKREGEKLSAGNKEERPQGNDVEFLKARKSRDEQRSLHLSLKSEIAKLCGILDVPDNVKRMADEFLDYVMNNHHVNSTLPKSILEAFQIALCWAAAALAKHKIDHEASLMLAKQHLKFDCRKDEANVIYSMLRCLKNIFLHRTGNYNVTGSPKASASGLSDKNYSCTGLALEAELAKKDVLKSIKEIQKKCQKKLRKLLFKHQEEKNKLDATYEEKRADLEKKYKIESAVIRSRSPNDVIRSENLKNLDIEYNERIEDLKHQYEMHLKDLENVQSTARQMLQNREVAWVEDVKSWAQDELLNALPSKEHGNGIEYLKTSMQAEPDYDPKNRCLVSNLVTKDTNFDRTVEAMIGTRLGSSRTPEIMSPMLVQCGDPVDGQTPPVEAASAYEGHDRAQNVCDSQGKIISVPAHPKEHNVNGATRMMNEGEGHNIFYDGCGEKTVPDGSEKDTAVDPSSSRELIPDRSPLNVSDRELSSRQCESPPLPDQQTSLEVSLCIRDGQVPIEVPETSCGIAEGNKGGEHQRDGVLLDQTATSEEREQMSRTMNNNTLSQALQDSPASLLTSPRMVDKDATVGEIQNSSGLVEQLSNPADIIPANQCNLQSVVEPLEQVQELPSAECLASNQDTAGEMQIFAPQVEPVSSPVDALPAGQFNHDPAMEPLEQLQQLPSAAAPAANLDTSGELLNSSQQVEPVCRQDNGAQANGLNHESRVRELLQQMQQLPPAVPPNSTHNPSVATETELRSNNEDSLCGQVSPAPMEVTNQAVVHSASELDSHTPVGTCRTQSLGTRNVFTPPEINNRPRQTTSQSADTDPLKNELDRLLRESEQTLKYYEDMKLQLKSDCERELEETRRKYDVKLQERELEFHLKKKNLETNINLVLMNKMWAEAFRSKCMDLRVSGPQGMQQDPSLAQQLVWTSSQQRDVRPSQAASPPHGPPASTLQHLAAASSPQTMAPPPPVSSMRTFPLGSSQILVPPMPATASSSPMVPLISTITSSQNMAPPLVAAYNAPPRPPHINSIPPLANHQAGSGFRTTPPHLQPYRPPTSGVLSQQAPSNNPAMPSLPNHARPTLPTNTSDPHNRVQRPEIPVRLPIPNFSAREPAMGGNSQLGMNLSNTLLRPSNVTSLQQSKFGTASSMRDDCVRPAMSPNVVCLSDDD 1991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4064g00093 1991 MobiDBLite consensus disorder prediction 1750 1798 - -
Pral4064g00093 1991 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 521 684 IPR001650 -
Pral4064g00093 1991 ProSiteProfiles Chromo and chromo shadow domain profile. 117 193 IPR000953 -
Pral4064g00093 1991 MobiDBLite consensus disorder prediction 1603 1647 - -
Pral4064g00093 1991 SUPERFAMILY Chromo domain-like 112 185 IPR016197 -
Pral4064g00093 1991 Coils Coil 1674 1694 - -
Pral4064g00093 1991 Pfam SNF2-related domain 252 491 IPR000330 GO:0005524|GO:0140658
Pral4064g00093 1991 MobiDBLite consensus disorder prediction 1878 1915 - -
Pral4064g00093 1991 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 255 399 IPR027417 -
Pral4064g00093 1991 MobiDBLite consensus disorder prediction 1603 1646 - -
Pral4064g00093 1991 SMART chromo_7 40 103 IPR000953 -
Pral4064g00093 1991 SMART chromo_7 110 186 IPR000953 -
Pral4064g00093 1991 Coils Coil 1076 1110 - -
Pral4064g00093 1991 CDD SF2_C_SNF 503 649 - -
Pral4064g00093 1991 MobiDBLite consensus disorder prediction 1303 1323 - -
Pral4064g00093 1991 Gene3D - 103 184 - -
Pral4064g00093 1991 Gene3D - 434 670 IPR027417 -
Pral4064g00093 1991 ProSiteProfiles Chromo and chromo shadow domain profile. 41 110 IPR000953 -
Pral4064g00093 1991 MobiDBLite consensus disorder prediction 830 854 - -
Pral4064g00093 1991 MobiDBLite consensus disorder prediction 1878 1918 - -
Pral4064g00093 1991 Gene3D - 1645 1726 - -
Pral4064g00093 1991 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 435 670 IPR027417 -
Pral4064g00093 1991 PANTHER HELICASE PROTEIN MOM1 824 1991 IPR039322 GO:0031507
Pral4064g00093 1991 SUPERFAMILY Chromo domain-like 43 100 IPR016197 -
Pral4064g00093 1991 MobiDBLite consensus disorder prediction 1270 1323 - -
Pral4064g00093 1991 Gene3D - 42 102 - -
Pral4064g00093 1991 Gene3D - 226 433 IPR038718 -
Pral4064g00093 1991 MobiDBLite consensus disorder prediction 834 854 - -
Pral4064g00093 1991 Coils Coil 1649 1669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4064g00093 Pral-Chr4064 426463 440763 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Pral4064g00093 SNF2_N 2.3e-06 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4064g00093 K11643 - aprc:113854369 1437.17