Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4064g00081 ATGGGCTTTGGAAATACAAGATCTGTAAGATTTCAAGATGATCTTGAACAAGCAAAAATCCCGGCGACTAACAGTGACAACGGGATCAAGGTCAAATACAACATTGATGGAGTACAAATATCTGAGCCTAGCGGCACCAAAATGGCTCAGAAGAAGGAGACAGGGAAGACTGGAAAGTTCTTGAAAGGTAGAGTATTGTCAAGGGTATTCTCAGAGGACTACGAAAGAGTGAAAAGAAAGATACTAGATCCTCGAGGGCAAACCATTCACCGATGGAACAAGATTTTCTTGGTGGCATGTTTAATATCTTTGTTTGTGGACCCTCTATTCTTTTACTTGCCAGTAGTTCGAGATGAAGTGTGCATTGAGATTGGAATAACACCTGAAGTTATCCTCACAATCATCAGAACAGTTGCAGATTTCTTTTACATGTTTCAAATTTTCATGAAGTTTCGTACAGCTTATGTTGCGCCTTCCTCTCGAGTATTTGGGAGAGGAGAACTTGTTATTGATTCTTCTAAGATTGCATTTAGGTACTTCAGAAACAGTTTCTGGTTAGACTTGGCTGCTGCCCTGCCTCTTCCACAGGTGTTAATTTGGCTTGTGATACCCTTCCTCAGGGGTTCTACCATGGCAAACACAAAAAACGTCCTTCGTTTCATCATCATCTTTCAGTATCTCCCAAGGCTGTTTCTAATTTTCCCGCTTTCATCACAAATTGTAAAGGCTACCGGAGTTGTAACAGAAACAGCATGGGCCGGTGCTGCTTACAACCTGATGCTTTATATGTTGGCAAGCCATGGTTTAGGTGCTATTTGGTACCTTCTATCAATTGAGCGACAGGAAGCATGTTGGAGAAGTGTCTGTGATCAGGAAAAGTCATCTTGTCAATATGGATATTTTGACTGCCACAGGATCAACGAAGCCAGTAGGGTCGCCTGGTTCATTGCGAGTAACATCACAAATTTATGCTCACCTGATGTCACCTTTTATCCGTTTGGCATGTACGGTGATGCTGTGACTTCTAAAGTCACAAGCTCGCCATTCTTTAATAAGTATTTCTACTGTCTTTGGTGGGGCTTAAGAAATCTGAGTTCTCTAGGACAAGATCTTCTCACTAGCACTTTTGTTGGAGAAATCATGTTTGCTATCATAGTTGCGACCCTTGGATTGGTTCTTTTTGCCTTGCTTATCGGTAATATGCAGACGTACCTTCAATCAACAACCGTCCGCTTAGAAGAGTGGAGAGTCAAAAGAACTGATACAGAACAATGGATGCATCACAGACAGCTACCTCCAGAACTAAGACAAGCTGTAAGAAAGTATGATCAATATAAATGGTTGGCTACCCGAGGAGTTGATGAGGAGGCTCTTCTTCAAGGACTTCCAGTGGATCTTCGAAGAGACATCAAGCGCCACCTTTGCCTTGACCTTGTCCGAGGAGTTCCATTATTTGACGAAATGGATGAGAGGATGTTAGATGCAATATGTGAAAGGCTGAAGCCTGCATTGTGCACGGAGGGAACTTACCTTGTTCGTGAGGGTGATCCAGTGAATGAGATGCTCTTCATAATAAGAGGCCATCTGGATTCCTACACCACCAATGGAGGCCGAACCGGGTTCTTCAATTCATGCCGGATAGGTCCGGGCGATTTCTGTGGCGAGGAAATACTGACATGGGCATTGGACCCTAGACCAAGTGTCATACTTCCATCTTCCACGAGAACAGTGAAAGCCATCTCTGAAGTAGAAGCCTTTGCACTCATGTCAGAGGACCTCAAGTTTGTAGCGTCTCAGTTCAGAAGACTACACAGTAAACAGCTTAGGCACAAGTTCAAGTTTTACTCGCACCAATGGCGAACATGGGCCGCTTGTTTCATCCAAGCTGCATGGAGAAGGTACAAGAAAAGGAAACTAAGGATTAAATTGAACCAAACTGATGCTGAGCCCGAAACACCAAGGTCTGGGTCATCAGGCCTAGTTGTATACGGACCAAGGATGGGTAAGAGCACTGGGAAAGGGGTTGACATGCATTCTGACACAGTTTCTGGGGTTGTAAGCTCTCTTCAGAAGCCTGAAGAACCAGATTTTACTGTTGATGAGTAA 2106 0.4378 MGFGNTRSVRFQDDLEQAKIPATNSDNGIKVKYNIDGVQISEPSGTKMAQKKETGKTGKFLKGRVLSRVFSEDYERVKRKILDPRGQTIHRWNKIFLVACLISLFVDPLFFYLPVVRDEVCIEIGITPEVILTIIRTVADFFYMFQIFMKFRTAYVAPSSRVFGRGELVIDSSKIAFRYFRNSFWLDLAAALPLPQVLIWLVIPFLRGSTMANTKNVLRFIIIFQYLPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHGLGAIWYLLSIERQEACWRSVCDQEKSSCQYGYFDCHRINEASRVAWFIASNITNLCSPDVTFYPFGMYGDAVTSKVTSSPFFNKYFYCLWWGLRNLSSLGQDLLTSTFVGEIMFAIIVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPPELRQAVRKYDQYKWLATRGVDEEALLQGLPVDLRRDIKRHLCLDLVRGVPLFDEMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEEILTWALDPRPSVILPSSTRTVKAISEVEAFALMSEDLKFVASQFRRLHSKQLRHKFKFYSHQWRTWAACFIQAAWRRYKKRKLRIKLNQTDAEPETPRSGSSGLVVYGPRMGKSTGKGVDMHSDTVSGVVSSLQKPEEPDFTVDE 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4064g00081 701 MobiDBLite consensus disorder prediction 645 701 - -
Pral4064g00081 701 SUPERFAMILY cAMP-binding domain-like 414 609 IPR018490 -
Pral4064g00081 701 CDD CAP_ED 484 615 IPR000595 -
Pral4064g00081 701 SUPERFAMILY Voltage-gated potassium channels 83 406 - -
Pral4064g00081 701 Pfam Cyclic nucleotide-binding domain 507 594 IPR000595 -
Pral4064g00081 701 Gene3D Helix hairpin bin 411 475 - -
Pral4064g00081 701 Pfam Ion transport protein 92 411 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pral4064g00081 701 FunFam Cyclic nucleotide-gated ion channel 1 411 475 - -
Pral4064g00081 701 FunFam Cyclic nucleotide-gated ion channel 1 482 600 - -
Pral4064g00081 701 Gene3D - 95 408 - -
Pral4064g00081 701 SMART cnmp_10 484 615 IPR000595 -
Pral4064g00081 701 PRINTS EAG/ELK/ERG potassium channel family signature 447 454 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4064g00081 701 PRINTS EAG/ELK/ERG potassium channel family signature 353 370 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4064g00081 701 PRINTS EAG/ELK/ERG potassium channel family signature 379 390 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4064g00081 701 PRINTS EAG/ELK/ERG potassium channel family signature 147 156 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4064g00081 701 PRINTS EAG/ELK/ERG potassium channel family signature 264 274 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4064g00081 701 PRINTS EAG/ELK/ERG potassium channel family signature 397 406 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral4064g00081 701 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 73 697 - -
Pral4064g00081 701 Gene3D Jelly Rolls 482 602 IPR014710 -
Pral4064g00081 701 ProSiteProfiles cAMP/cGMP binding motif profile. 484 581 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4064g00081 Pral-Chr4064 381897 385617 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4064g00081 58 700 Ion Channels AT2G28260 76.672 0.0 1026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4064g00081 K05391 - qsa:O6P43_000340 1149.04