Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4064g00067 ATGGTTTTTAATCACTTCTGCTACATTTTCTCTGCAACTAAATGGTGTGCTGGGGATATGACATGTGGTACTGAAAAGGCAATTTTCTTTATGAGCTGCCCTTTGTTAGAGGGGGGTACCAGTAACATGAAGGATTCTTGGTTTTTTGACAAGAGTTTTAATGGCTTGCCGGATGAAATTTTTGATGATGTCATCAAATTTTTTGACTTCCCGCTGGAAGATGTGGAACCTAATGCTATGGAAGAAGATTGGGATGCCCAATTCAAACGCCTTGACGAGCCATATTTAGATGTTCTCTCCGGGTTGCCCTCTGAGCTGCATGATAAAACTCGGAAAGGCAATCCAAAACTTGAGAGGCTCTCTACTTCTCATTCTGAGATTTCGCCAATAGGAGGAGCGTCAGAGACTAGTAAAGTGACGTATGTCAAAAGCATTCCCAATCCAAAAGTCTCGTCCCACAGCAAGGATTTCCTCCAATTCCAAATCTACAGTCCAGTCTCTGTTTTTGAAAGCAGTAGTTCTTCATCAGGCGAGAATGCCTTTGATCAGCCTGTCATCCGAAAGCGAGCTCGCAGTAAACGCCGTCCTCTCTCAAGCCTCAGCCCTCTGTTCTCAGTTCCTTTCATCTCTTCTTCACAAGCTTTCCCAAAACCTCGAATGGCAGCTGCTGCTGAATCAGATTTTGAAACATTCCTTACTTGGAAACCATCGTACGGTCCAAAAGAGAAGCTGACAAAAAAGGATCTCTCTGTTCCCTCTTGTCATATTAATAGGAAGAGATCATCATTGCAGGAGTCAATCATCCCCAGAAAATGCACGCATTGTCAGGTTACAAAGACCCCCCAGTGGAGGGAGGGACCCATGGGCCCCAAAACCCTATGCAATGCGTGTGGGGTTCGATACCGGTCCGGCCGCCTCTACCCTGAATACCGGCCTGCCGCAAGTCCAACTTTTGTAGCATCATTGCACTCTAACTGTCACAAAAAGGTCTTAGAGTTGAGAAACAGAGCTACCAGTGAAGCCGATAAATGTTCTATATTGCCTTTGTCTTCAAAACCTTCATGA 1065 0.4507 MVFNHFCYIFSATKWCAGDMTCGTEKAIFFMSCPLLEGGTSNMKDSWFFDKSFNGLPDEIFDDVIKFFDFPLEDVEPNAMEEDWDAQFKRLDEPYLDVLSGLPSELHDKTRKGNPKLERLSTSHSEISPIGGASETSKVTYVKSIPNPKVSSHSKDFLQFQIYSPVSVFESSSSSSGENAFDQPVIRKRARSKRRPLSSLSPLFSVPFISSSQAFPKPRMAAAAESDFETFLTWKPSYGPKEKLTKKDLSVPSCHINRKRSSLQESIIPRKCTHCQVTKTPQWREGPMGPKTLCNACGVRYRSGRLYPEYRPAASPTFVASLHSNCHKKVLELRNRATSEADKCSILPLSSKPS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4064g00067 354 SMART GATA_3 266 316 IPR000679 GO:0006355|GO:0043565
Pral4064g00067 354 CDD ZnF_GATA 271 318 IPR000679 GO:0006355|GO:0043565
Pral4064g00067 354 ProSiteProfiles GATA-type zinc finger domain profile. 270 302 IPR000679 GO:0006355|GO:0043565
Pral4064g00067 354 PANTHER GATA TRANSCRIPTION FACTOR 81 339 - -
Pral4064g00067 354 Gene3D - 268 316 IPR013088 GO:0006355|GO:0008270
Pral4064g00067 354 ProSitePatterns GATA-type zinc finger domain. 272 297 IPR000679 GO:0006355|GO:0043565
Pral4064g00067 354 FunFam GATA transcription factor 261 346 - -
Pral4064g00067 354 Pfam GATA zinc finger 272 305 IPR000679 GO:0006355|GO:0043565
Pral4064g00067 354 MobiDBLite consensus disorder prediction 107 130 - -
Pral4064g00067 354 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 265 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4064g00067 Pral-Chr4064 320068 322894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4064g00067 53 352 C2C2-Gata Transcription Factor Family AT1G08010 37.540 3.19e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pral4064g00067 GATA 1.6e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4064g00067 - - pcin:129312873 463.381