Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4064g00054 ATGGCGAAGGACGTTGAGGTGGCGGAGCAAGGGGAGTTCTCGACGAAGGACTACCACGAACCACCGCCGGCGCCGTTGATCGACCCGGAGGAGCTTGGGAAGTGGTCGTTTTACAGGGCGTTGATAGCTGAGTTCGTGGCGACGCTGCTTTTCCTGTACGTAACGGTGTTGACGATCATTGGACAAGGCAGCGTGACGGACACCACCAAGAATCCCAAAGCCACCGACTGCGATGGCGTCGGCACCTTGGGCATCGCCTGGGCCTTCGGTGGCATGATCTTCATCCTCGTTTACTGCACAGCCGGTATCTCTGGAGGACACATCAACCCGGCGGTTACATTCGGGCTGTTCCTGGGGCGGAAGGTGTCGCTGATTCGAGCGTTCTTGTACATGGTAGCACAGTGCGCCGGAGCAATCTGCGGCACCGGACTCGCCAAGGGCTTCCAAACAGCATACTACGACCGGTACGGCGGCGGCGCCAACGTCGTCCAGCCCGGCTACAGCAAAGGCACCGCCTTGGGCGCCGAGATCATCGGCACCTTCGTCCTTGTCTACACCGTCTTCGCGGCCACCGATCCCAAACGAAACGCCCGTGACTCCCATGTTCCCGTGCTGGCTCCACTTCCCATCGGATTCGCCGTCTTCATGGTTCACTTGGCTACAATTCCGGTCACCGGTACCGGTATCAACCCTGCAAGGAGTTTCGGAGCGGCTGTAATCTATAACAGTGACAAGGCCTGGGATGATCACTGGATTTTCTGGGTTGGCCCAGCAATCGGAGCTTTTGCTGCCGCAGTATACCACCAGTATATTCTCAGAGCTGGGGCCATTAAAGCTCTTGGATCCTTCAGGAGCAACAATTAA 864 0.5787 MAKDVEVAEQGEFSTKDYHEPPPAPLIDPEELGKWSFYRALIAEFVATLLFLYVTVLTIIGQGSVTDTTKNPKATDCDGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRAFLYMVAQCAGAICGTGLAKGFQTAYYDRYGGGANVVQPGYSKGTALGAEIIGTFVLVYTVFAATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIYNSDKAWDDHWIFWVGPAIGAFAAAVYHQYILRAGAIKALGSFRSNN 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4064g00054 287 ProSitePatterns MIP family signature. 107 115 IPR022357 -
Pral4064g00054 287 Pfam Major intrinsic protein 32 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4064g00054 287 FunFam Probable aquaporin PIP1-2 24 287 - -
Pral4064g00054 287 NCBIfam MIP family channel protein 43 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4064g00054 287 Gene3D Glycerol uptake facilitator protein. 24 287 IPR023271 -
Pral4064g00054 287 MobiDBLite consensus disorder prediction 1 16 - -
Pral4064g00054 287 CDD MIP 39 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4064g00054 287 PRINTS Major intrinsic protein family signature 175 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4064g00054 287 PRINTS Major intrinsic protein family signature 126 145 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4064g00054 287 PRINTS Major intrinsic protein family signature 211 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4064g00054 287 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4064g00054 287 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4064g00054 287 PRINTS Major intrinsic protein family signature 89 113 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4064g00054 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 7 276 IPR034294 -
Pral4064g00054 287 SUPERFAMILY Aquaporin-like 31 273 IPR023271 -
Pral4064g00054 287 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4064g00054 Pral-Chr4064 226684 228969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4064g00054 1 285 Major Intrinsic Protein MIP AT5G60660 76.842 3.50e-160 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4064g00054 K09872 - gmx:100811119 502.286