Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4064g00052 ATGCAACTAACAACCAGAGATATTTTACCTCTACTTATGGTGATCCAACTTCTATATCCCAACAAATCCAGCTCCACATTATATGCTGAAGCTCTGTTCACTTTCAAGATTACGCTTGGCAGTCCACAGCAAATCTCATGTAGTATTGCAAAATACCCAGGTGCTTTTCCTTTGTCTAACGGGGTACCAGCAAAGATTGATGGGACAAATGAAGTTCCAACGCTTACACCTTTGCAAGAAGCTCAAGTTAAAAGACCTGGAGGAACGAGCGTTGCTGCCATTGTTGGTGGTGTTGCTGCTGCCGTACTTGTGATTGTCATAGTAGTAATTGTTTATGCCTGTTTGATGCGTGTTAAGAGATTAATAAGGCAAACATCTGACACTGCTTCTTCTTTTCCATCTCCAACTGTTGAATTGGGAACACGCAGTACCTCACAGGACACAAGGCGGTTCACGATCATGGAACTTGAACAGGCCACAAGAAATTTCAGTGAAAGTAACCTTGCAGGTGAAGGTAGATTTGGTTTGGTTTACAAGGGTTTACTTCAAGATGGATCTATTGTTGCTATAAAAAGGCGCCAATATGCTTTGATTCACAGTTTCATCCCTAAGGTGATGCAAATAGCTAACATTCACCACATCCATCTTGTCAAGCTTATTGGTTATTATGAAGATGGCTATCAACAGTTACTTGTGCATGAATATCTTCCCAATGGAAATGTAGGAAATCACCTATACGACAATGAAGGTTTACCAATTGGAAGGTTAGATATGCAGCGAAGATTGTCTATAGCTTTGGGTGCTTCCAAAGGAATGGAACATCTTCACTGCTTGGCTCCTCCAATGCTGCACACAAATTTTAGAACGAGCAATGTTCTTGTGGATGAAAGCTTCACCGCCAAGGTTTCTGATTATGGACTCTGCAAGCTGCTAGCTAACTCTGACCATGCTGGCTCATCCTCAAACACAGACTTCTTTCGTGACCCGGAGTTGAATCAATCAAAGGATTTCTCAAAGACGAGCGATATATACAGTTTTGGGGTCTTCTTACTTGAATTGATTAGTGGACGAGAAGTGCATAAGTCAAACTCGGCAGAGAATCTGGTATTTCAGGTTAACAACAGCCATGGCGTTTTGGAGGAGTTTGTGGACGCAACATTAGGAGGCCATGAAAAGCAAGCTGCGAAGAAGGTGATGAAGTTGGCGACGATGTGTCTAAACGAGAGTACTACAAGACCATCAATGGCACAAATTGTGCGAGAGGTGGAGCAGATTCAAAGAGAATTCAGCTCCTTACATTCTTACAACACTGAGGTGATTGGTGGGGTCACTCTTGGGAGTGATCTCTTCAAGTAG 1356 0.4255 MQLTTRDILPLLMVIQLLYPNKSSSTLYAEALFTFKITLGSPQQISCSIAKYPGAFPLSNGVPAKIDGTNEVPTLTPLQEAQVKRPGGTSVAAIVGGVAAAVLVIVIVVIVYACLMRVKRLIRQTSDTASSFPSPTVELGTRSTSQDTRRFTIMELEQATRNFSESNLAGEGRFGLVYKGLLQDGSIVAIKRRQYALIHSFIPKVMQIANIHHIHLVKLIGYYEDGYQQLLVHEYLPNGNVGNHLYDNEGLPIGRLDMQRRLSIALGASKGMEHLHCLAPPMLHTNFRTSNVLVDESFTAKVSDYGLCKLLANSDHAGSSSNTDFFRDPELNQSKDFSKTSDIYSFGVFLLELISGREVHKSNSAENLVFQVNNSHGVLEEFVDATLGGHEKQAAKKVMKLATMCLNESTTRPSMAQIVREVEQIQREFSSLHSYNTEVIGGVTLGSDLFK 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4064g00052 451 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 100 425 IPR047117 -
Pral4064g00052 451 SUPERFAMILY Protein kinase-like (PK-like) 144 422 IPR011009 -
Pral4064g00052 451 ProSiteProfiles Protein kinase domain profile. 163 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4064g00052 451 Gene3D Phosphorylase Kinase; domain 1 126 235 - -
Pral4064g00052 451 Gene3D Transferase(Phosphotransferase) domain 1 236 440 - -
Pral4064g00052 451 Pfam Protein tyrosine and serine/threonine kinase 170 421 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4064g00052 Pral-Chr4064 218008 221446 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4064g00052 87 427 Receptor kinase-like Gene Family AT5G49780 33.520 1.68e-52 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Pral4064g00052 PK_Tyr_Ser-Thr 4.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4064g00052 - - gmx:100780443 538.11