Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4064g00040 ATGGGCTGCTGTGGTTGCTTTGGTTTCATAAGAAAATTCAAACAGCGCAGAAATCAGTCTGGCAATAAGAGTAGTCTCTCTCAGGAGCCATTGTTGGATGAAACTGAAGACAGAGATGATGATGGATCCTATAACGGTGATGTTACTGACACCATCAGTGGAGACGATAGTGAAGTTCCAATTTGTGCCAAACGTTCTGAGGAAATTTTGATGATGAGAGAAGAGAAAGATATGATTTGTAGGCAGTTTCCTGTTAAGGAAACTCACAAAGTTGTTCGCGCAGAGGATGAAAATGGTAACAAGATGGTAAATGAATATGTTCGGGAGTACAAGATTGGTTCTGGTAGTTATGGGAAAGTGGTTTTATACCGAAGCCGTGTAGATGGAAGGCATTATGCAATCAAGGCCTTTCATAAGTCTCATTTACAGAAGCTTCGAGTCGCACCCTCAGAGACTGCCATGACTGATGTTCTGCGGGAGGTACTCATCATGAAAATGCTGGAACATCCTAACATAGTCAATCTCATTGAGGTGATTGATGACCCAGAATCAGATCACTTCTACATGGTACTTGAATATGTAGAAGGCAAATGGGTTTGTGAGGGTTCAGGTCCTTCTTGTAGCTTGGGTGAGGAGACTGCTAGGAAATACTTGCGTGATATAGTTTCAGGATTAAGATACCTTCATGCTCATAATATAGTGCACGGGGATATTAAACCTGATAATCTGTTGGTTACACGTCATGGTACGGTAAAGATTGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGATGACAATGATGAGCTTCGCCGGTCACCTGGGACACCTGTTTTCACTGCTCCAGAATGTTGCTTAGGCCTTACCTATAATGGTAAAGCTGCGGACACTTGGGCAGTTGGAGTTACTTTGTACTGCATGATTTTGGGTGAATACCCATTTCTTGGAGACACACTTCAAGACACTTATGACAAAATTGTCAATAATCCTTTAGTGCTCCCCGATGATTTGAATCCCCAAATAAGGAACTTACTGGAAGGATTACTTTGCAAAGATCCAAATCATCGGATGACATTGGATGATGTTGCACAGCATAGTTGGGTTATTGGAGATGATGGGCCAATTCCTGAATATTTGTGTTGGTGCAAACGCAAGAGATTAGGAGCAGAAGACTTGAAATAG 1179 0.4224 MGCCGCFGFIRKFKQRRNQSGNKSSLSQEPLLDETEDRDDDGSYNGDVTDTISGDDSEVPICAKRSEEILMMREEKDMICRQFPVKETHKVVRAEDENGNKMVNEYVREYKIGSGSYGKVVLYRSRVDGRHYAIKAFHKSHLQKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDHFYMVLEYVEGKWVCEGSGPSCSLGEETARKYLRDIVSGLRYLHAHNIVHGDIKPDNLLVTRHGTVKIGDFSVSQAFEDDNDELRRSPGTPVFTAPECCLGLTYNGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNPLVLPDDLNPQIRNLLEGLLCKDPNHRMTLDDVAQHSWVIGDDGPIPEYLCWCKRKRLGAEDLK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4064g00040 392 Pfam Protein kinase domain 106 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4064g00040 392 SUPERFAMILY Protein kinase-like (PK-like) 98 378 IPR011009 -
Pral4064g00040 392 SMART serkin_6 106 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4064g00040 392 CDD STKc_LKB1_CaMKK 112 367 - -
Pral4064g00040 392 Gene3D Phosphorylase Kinase; domain 1 100 202 - -
Pral4064g00040 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Pral4064g00040 392 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Pral4064g00040 392 MobiDBLite consensus disorder prediction 18 57 - -
Pral4064g00040 392 FunFam Serine/threonine-protein kinase GRIK2 96 390 - -
Pral4064g00040 392 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 47 369 - -
Pral4064g00040 392 FunFam Serine/threonine-protein kinase Ssp1 100 202 - -
Pral4064g00040 392 Gene3D Transferase(Phosphotransferase) domain 1 204 373 - -
Pral4064g00040 392 ProSiteProfiles Protein kinase domain profile. 106 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4064g00040 Pral-Chr4064 161398 167038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4064g00040 112 373 CBL-interacting serine-threonine protein kinases AT5G10930 32.453 3.67e-42 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Pral4064g00040 Pkinase 1.2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4064g00040 K00908 - qsa:O6P43_020427 653.284