Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4064g00036 ATGGCTTCTTCCAAAAATTCGAAGACAGAACAGAAGAGCGAAGCTGCGGACAGCTCCAAAACAGTGAAGAAAGCCGCTAAGCCCAGAAAAGAGAAGCACTTGGACAAGAAAAACAAGAGTCGTAATAAGAAGAAAAAACTTAAGAATTCTGATGTGAATAAGGGAGATAAAGAGATCGTTGTTCCGTCTTCCAGCACCGAGTCCCATGAAAAATCCGAAGACGAAGGGCGCCAGGAAGACAAGACTGAGATCACAAATGGGCGAACCAGTGCAACGAAACCTGGAAAAGACAAAGTCAAAGGAATGAAATATGATGACGACGATGAAGCTGAAGGGAAAGGAGACGCCAGAGGCAATGTATTTCCCATGAATCGTATCCGGACGATAATTAGGGGCCAAGATCTTGACTTGCGTATTTCGCAGGAAGCCATATTTGTCATTAACAAAGCCACGGAGACGTTCCTTGAACAATTTACGCGGGACACTCACGCTTCCTGTGTTCGGGATCGGAAAAAATCTCTTGCTTACAAACACCTATCATCTGTTGTTAGTAAGCAGAGCAGATACGACTTTCTATCAGATTTCGTCCCAGAGAAAATAAAAGCCGAGGACGCTTTAAGGGAGAGAAATTCCAGTGTGAATGGTGGTTAG 651 0.4424 MASSKNSKTEQKSEAADSSKTVKKAAKPRKEKHLDKKNKSRNKKKKLKNSDVNKGDKEIVVPSSSTESHEKSEDEGRQEDKTEITNGRTSATKPGKDKVKGMKYDDDDEAEGKGDARGNVFPMNRIRTIIRGQDLDLRISQEAIFVINKATETFLEQFTRDTHASCVRDRKKSLAYKHLSSVVSKQSRYDFLSDFVPEKIKAEDALRERNSSVNGG 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4064g00036 216 MobiDBLite consensus disorder prediction 1 116 - -
Pral4064g00036 216 Gene3D Histone, subunit A 64 198 IPR009072 GO:0046982
Pral4064g00036 216 MobiDBLite consensus disorder prediction 25 48 - -
Pral4064g00036 216 MobiDBLite consensus disorder prediction 63 86 - -
Pral4064g00036 216 SUPERFAMILY Histone-fold 138 199 IPR009072 GO:0046982
Pral4064g00036 216 MobiDBLite consensus disorder prediction 10 24 - -
Pral4064g00036 216 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 71 211 - -
Pral4064g00036 216 Coils Coil 30 50 - -
Pral4064g00036 216 MobiDBLite consensus disorder prediction 93 115 - -
Pral4064g00036 216 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 121 183 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4064g00036 Pral-Chr4064 140157 142756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4064g00036 121 182 CCAAT-HAP5 Transcription Factor Family AT1G07980 48.387 9.32e-17 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pral4064g00036 CBFD_NFYB_HMF 2.3e-13 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4064g00036 - - adu:107476944 185.267