Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4064g00024 ATGGCGAAGGATCAAGTGCGATTTAACAACACGTTCCCACCTGGTTTTCGATTCCATCCATCTGATGAGGAACTCATAGTTCATTACTTGAAGAAGAAGATCAACTCGCATCCACTTCCAGCGCCTATCGTTGCTGACATTGATCTTTACAAGTTTAATCCGTGGGAGCTACCTGAGAAAGCTTTGTTTGGAGAGGATGAGTGGTATTTCTTTAGCCCCAGAGATAGGAAATATCCAAATGGGTTAAGGCCAAACAAAGCAGCAGCTTCTGGGTATTGGAAAGCCACAGGAACCGACAAGCCAGTTCTCACTTGCTGTGGATCAAAGCTCATAGGAGTGAAGAAAGCTTTGCTTTTCTATTCAGGTCGTCCACCTAAAGGGACTAAGACTGATTGGATCATGAACGAATATAGATTGGCTGACACAATCAGAAAACCTTCTCCTTCTAGATTCAAAGGTTCCATGCGATTGGATGATTGGGTACTATGTCGGGTTCGATATAAAGGCTACTCATCAAATCATAGAGGTGAGAATCAGGAGAGTCAGTGCGGCTCAAAATTATTGAACCTGCCAACGATCACAGATTATCGAATATTAGCTTCTGCTTTTGCCGATGAACCTAAGCTTCCCTCATCTGACCACATGTCTGGCATGAACTTTGGAAGCAGCAAAGGCGACACTTACACTTCAGTGAGTCCTCAGATGACAATCCCTTTGTTGGACTACAACAGTTGCTTCGACTCGCTGAAAAGAGCGTCTAATATCGAGGATAGTCGACGTGGAAATTTCATTTCTTTTAACCGTAGCAAGCCAAACCCTGAGAACAAGATTGATAATCTTCCAGACACAAACTGCTATAGCCAAAGTCTTTGTAATGAGGGAGCTCCTGGCCCCAGAACACTAGATCCCGCCATCAATTTTCAAGAACTCAATGAATTACCCTTCACAGGGGGGTTCATGCAATGA 966 0.4389 MAKDQVRFNNTFPPGFRFHPSDEELIVHYLKKKINSHPLPAPIVADIDLYKFNPWELPEKALFGEDEWYFFSPRDRKYPNGLRPNKAAASGYWKATGTDKPVLTCCGSKLIGVKKALLFYSGRPPKGTKTDWIMNEYRLADTIRKPSPSRFKGSMRLDDWVLCRVRYKGYSSNHRGENQESQCGSKLLNLPTITDYRILASAFADEPKLPSSDHMSGMNFGSSKGDTYTSVSPQMTIPLLDYNSCFDSLKRASNIEDSRRGNFISFNRSKPNPENKIDNLPDTNCYSQSLCNEGAPGPRTLDPAINFQELNELPFTGGFMQ 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4064g00024 321 Gene3D NAC domain 21 171 IPR036093 GO:0003677|GO:0006355
Pral4064g00024 321 PANTHER NAC TRANSCRIPTION FACTOR 56 12 211 - -
Pral4064g00024 321 SUPERFAMILY NAC domain 10 168 IPR036093 GO:0003677|GO:0006355
Pral4064g00024 321 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
Pral4064g00024 321 FunFam NAC domain-containing protein 72-like 21 173 - -
Pral4064g00024 321 ProSiteProfiles NAC domain profile. 12 168 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4064g00024 Pral-Chr4064 111751 112969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4064g00024 12 173 NAC Transcription Factor Family AT1G61110 70.238 1.11e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4064g00024 NAM 1.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4064g00024 - - gmx:100817193 369.007