Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4064g00023 ATGAGCGTCATTGATATTATCTTCCGCGTCGATTCCATATGCCAGAAATACGAGAAATATGACATCGATAAGCAGCGGGAGCTCAATGCCTACGGTGATGATGCCTTTGCTCGCCTCTACGCTGCCGTGGAAAGCAACATCCAAGCCGCCCTTAATAAATCAGAGATTGCTTCTAATGAGAAGAACAGGGCATCTGCAGCGGCATTGAATGCGGAAGTTCGTCGAACAAAAGCTCGACTCATGGATGAAGTCCCTAAGCTTCGTAAACTGGCGCAGAAGAAGGTTAAGGGTCTCACAAGTGAAGACATGGCCATTCGAAATGATATGGTTTTAGCATTGCCAGAAAGGATTCAAGCAATACCAGATGGTATCACTGGTGCAGCTAATCAAGCTGCAGGGGGTGTTTCTCCCTCATCTCATCCTAATATCATGTTTGATTCGTCAGGATACAAGGACGATTTATATTACCAACAAACAGAAGAATCAAGTCAGTTTAGATCAGAGTATGAGATGCGAAAAATGAAACAGGATGAAGGGCTTGATATCATATCAGAAGGATTGGATACGTTGAAGAATTTGGCCCTCGATATGAATGAGGAATTGGACCGGCAAGTTCCATTAATGGATGAAATTGGTACAAAGGTCGATAAGGCCACATCCGAGCTTAGAAATAATAACACGAGGCTGAGGAAAACTCTCAACGAGGTGAGGTCTAGTCGAAATTTTTGCATTGACATCATTCTGCTGTGTGTTCTCCTGGGCATCGTTTCCTACATATACAAGTAA 786 0.4351 MSVIDIIFRVDSICQKYEKYDIDKQRELNAYGDDAFARLYAAVESNIQAALNKSEIASNEKNRASAAALNAEVRRTKARLMDEVPKLRKLAQKKVKGLTSEDMAIRNDMVLALPERIQAIPDGITGAANQAAGGVSPSSHPNIMFDSSGYKDDLYYQQTEESSQFRSEYEMRKMKQDEGLDIISEGLDTLKNLALDMNEELDRQVPLMDEIGTKVDKATSELRNNNTRLRKTLNEVRSSRNFCIDIILLCVLLGIVSYIYK 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4064g00023 261 PANTHER SYNTAXIN 42 251 IPR045242 -
Pral4064g00023 261 Gene3D - 170 231 - -
Pral4064g00023 261 SUPERFAMILY SNARE fusion complex 163 231 - -
Pral4064g00023 261 FunFam Syntaxin 6 177 240 - -
Pral4064g00023 261 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Pral4064g00023 261 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Pral4064g00023 261 CDD SNARE_Qc 175 231 - -
Pral4064g00023 261 Pfam SNARE domain 207 257 IPR000727 -
Pral4064g00023 261 Coils Coil 215 235 - -
Pral4064g00023 261 SMART tSNARE_6 165 232 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4064g00023 Pral-Chr4064 108122 110741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4064g00023 1 260 SNARE and Associated Proteins AT3G09740 66.031 3.20e-131 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4064g00023 K08506 - gmx:100777251 400.208