Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4063g00010 ATGGAAGTTATCGGGCTCAAGCAGCAGGAGAAGATGGGGTTTGAGGAAACGGAACTGAGGCTTGGACTGCCTGGAAACGGAGGCTCTGGTGCTGAAGGAGGAGAAGCTGCGAGGAAGAGAGGATTTTCTGAGACTGAGAATAATGGCACTGTGGATTTGATGCTGAATCTCTCTGCTTCCAAAGAAGCTGATCATTCCACTGACAAATCCAAGGAGAAGACCCTTCTTCCTGCCGATCCCGCCAAGCCTCCTGCCAAGGCTCAAGTGGTGGGGTGGCCACCCGTGAGATCGTTCCGGAAGAACATGCTGGCCCAAAAGAAGAACGGAGAAGAGAGTGATCAGAAAAGCAGCCCTAATGGAAGCTTTGTGAAAGTGAGCATGGACGGAGCTCCATATCTTCGCAAAGTGGACCTCAAGATGTACAAGAGCTATCAAGACCTCTCTGATGCCTTAGGCAACATGTTCAGTTCCTTCACCATAGGGAATTGTGGATCCCAAGGACTGAAGGATTTCATGAATGAGAGTAAGCTGATGGATCTGTTGAACAGCTCCGACTATGTCCCGACCTATGAGGACAAGGATGGCGACTGGATGCTTGTCGGTGATGTCCCTTGGGAGATGTTCGTTGAATCCTGCAAGCGCTTGCGTATTATGAAGGGAAAAGAAGCTATTGGGCTTGCACCAAGAGCAATGGAGAAATGCAAGAACCGAGGCTAG 717 0.5007 MEVIGLKQQEKMGFEETELRLGLPGNGGSGAEGGEAARKRGFSETENNGTVDLMLNLSASKEADHSTDKSKEKTLLPADPAKPPAKAQVVGWPPVRSFRKNMLAQKKNGEESDQKSSPNGSFVKVSMDGAPYLRKVDLKMYKSYQDLSDALGNMFSSFTIGNCGSQGLKDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRG 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4063g00010 238 SUPERFAMILY CAD & PB1 domains 115 219 - -
Pral4063g00010 238 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 225 IPR003311 GO:0005634|GO:0006355
Pral4063g00010 238 ProSiteProfiles PB1 domain profile. 120 220 IPR000270 GO:0005515
Pral4063g00010 238 Gene3D - 114 232 - -
Pral4063g00010 238 Pfam AUX/IAA family 16 229 IPR033389 -
Pral4063g00010 238 MobiDBLite consensus disorder prediction 62 76 - -
Pral4063g00010 238 MobiDBLite consensus disorder prediction 1 89 - -
Pral4063g00010 238 FunFam Auxin-responsive protein 115 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4063g00010 Pral-Chr4063 40364 43028 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4063g00010 110 228 B3 DNA Binding Superfamily AT4G23980 31.092 5.18e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pral4063g00010 AUX_IAA 7.9e-84 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4063g00010 K14484 - qsu:112007559 332.798