Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4063g00009 ATGGAGAATTCAGTATCAATGGGTGAGCTGAACCTGAAGGACACAGAGCTAAGGTTGGGATTGCCAGGCAGCGACGAGCCAGAGAAACGATGCAGTGTTGGAAGCAAAAGGAAATGTTCACCTGAGGAAACAAGTCGTGAGGAGGAATTAACAGGCAAGAGTAGTAGTGATGCTAAAAGTGATCAAAACGAGTCAGACCATGGCCCACCAGCAAAGGCGCAAGTAGTGGGATGGCCACCAGTGCGAAGTTTCAGAAAAAATAGTATGCAGCAAAAGAAGGAGGAAGAGAGTGGAAGGTACGTGAAAGTGAGCATGGCTGGTGCTCCTTACTTAAGGAAGATAGATATCAAGGTTTTTAAGAGCTACCCACAAGTCCTCAAGGCCTTAGAAAAGATGTTCGAGTGCACTTTTGGTGAATATTCAGAAAGAGAGGGATACAATGGATCTGAATATGTTCCCACATATGAAGACAAAGACGGCGATTGGATGCTTGTTGGAGATGTTCCCTGGGAGATGTTCACATGCTCCTGCAAAAGGCTCAGAATCATCAAAGGATCTGAAGCTAAGGGTTTGGGTTGTCTATGA 585 0.4547 MENSVSMGELNLKDTELRLGLPGSDEPEKRCSVGSKRKCSPEETSREEELTGKSSSDAKSDQNESDHGPPAKAQVVGWPPVRSFRKNSMQQKKEEESGRYVKVSMAGAPYLRKIDIKVFKSYPQVLKALEKMFECTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWEMFTCSCKRLRIIKGSEAKGLGCL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4063g00009 194 Pfam AUX/IAA family 32 192 IPR033389 -
Pral4063g00009 194 ProSiteProfiles PB1 domain profile. 98 190 IPR000270 GO:0005515
Pral4063g00009 194 MobiDBLite consensus disorder prediction 1 96 - -
Pral4063g00009 194 MobiDBLite consensus disorder prediction 19 66 - -
Pral4063g00009 194 SUPERFAMILY CAD & PB1 domains 94 182 - -
Pral4063g00009 194 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 9 189 IPR003311 GO:0005634|GO:0006355
Pral4063g00009 194 Gene3D - 92 194 - -
Pral4063g00009 194 FunFam Auxin-responsive protein 93 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4063g00009 Pral-Chr4063 32903 34100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4063g00009 87 191 B3 DNA Binding Superfamily AT2G46530 36.792 4.19e-13 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pral4063g00009 AUX_IAA 1.3e-55 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4063g00009 K14484 - gmx:100780752 279.256