Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4062g00004 ATGGACACCCACTCGTCTCACGCGGCCGGGAACATTCGCTCCCGTAGCTCCCAATCCCCCTCTCCCTCTCACTCTGCTTCTGCCTCTGCCACCTCTACCATCCACAAGCGCAAAATGGCGTCGGATGATCACGCTCCTCCCTTTCCCCCCTCTTCCTTTTCCGCCGACACCCGCGACGGTGCTTTAACGTCCAATGATGACCTCGAGAGCATTTCTGCTCGCGGCGCTGATTCCGACTCCGACGATGAGTCGGAGGATGCCGTTGTTGACGACGACGAGGAGGATTACGACAATGAATCCTCCATGCGCACCTTCACTGCCGCTAGGCTTGAAAACCCCCCCTCAGCTCCGCGGAACACCAAGCTCCAAAAGGATAATACGACGGTCAAGATAGAGAATTCGGATAGCGCTAAAGACGCTGCCGCAGCCGGGACTGCTTCGGTGGGAACCATTCCCACCTCGACCTCAGTTCCGGGCATTATGGTTAAGGAGGACGCAACAAAGATTTTTACTGATAATTTGCAGACGAGTGGGGCATACTGTGCCAGGGAAGAGAATCTCAGGAGAGAGGAAGAAGCAGGGAAGCTGAAATTCGTATGCCTTTCAAATGATGGTGTTGATGAGCACATGGTTTGGTTGATAGGATTAAAGAATATTTTTGCTAGACAACTTCCCAACATGCCCAAGGAATACATTGTCCGACTTGTTATGGATAGGAGCCACAAGTCTGTGATGGTTATAAGACGTAATCATGTTGTTGGAGGAATTACATATCGCCCATATGTAAGCCAAAAGTTCGGTGAAATAGCCTTTTGTGCAATAACAGCTGATGAGCAAGTAAAAGGTTATGGCACCAGACTGATGAATCACTTGAAACAGTATGCTCGTGATGAGGATGGATTGACACACTTTCTCACATATGCTGATAATAATGCTGTTGGCTATTTTATCAAGCAGGGCTTCACAAAAGAGATTCACTTGGAGAAAGATAGATGGCAAGGGTATATCAAGGATTATGACGGAGGAATTCTCATGGAATGCAAGATCGATCCAAAGCTCCCATACACTGATTTATCAACTATGATTCGTCGTCAGAGGCAGGCTATAGACGAAAAGATAAGAGAGCTGTCAAACTGTCACATTGTTTATCCTGGATTTGATTTTCAGAAGAAAGAAGCTGGTATTCCTAAAAAATCAATCAAAGTTGAGGACATTCCTGGTTTGAGAGAGGCTGGATGGACTCCTGATCAGTGGGGTCATTCCCGATTTAGAAGTTTAAGTGTTTCTACAGACAGCGCTGCGAATCAGAAACATTTGACTGCATTTATGCGATCACTTCTGAAGTCATTGCTGTTATCTTGTATACAGTCAATGCACGATCATGCTGATGCCTGGCCATTCAGGGAACCCGTTGATGCCCGGGATGTTCCTGATTATTATGACATCATCAAAGATCCAATGGATCTGAAGACAATGTCTAAGAGGGTGGAGTCTGAGCAATATTATGTTACATTTGAGATGTTCGTTGCAGATGTCAGAAGAATGTTCGCCAATGCACGGACCTATAACTCCCCAGACACGATTTATTACAAATGCGCTACCAGGCACGATGCTCCAAGTCGACTGTTTTTCCTTTCCTTCCCCTTTCCTGTCCAGTTTGATATGTAG 1668 0.4652 MDTHSSHAAGNIRSRSSQSPSPSHSASASATSTIHKRKMASDDHAPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDDESEDAVVDDDEEDYDNESSMRTFTAARLENPPSAPRNTKLQKDNTTVKIENSDSAKDAAAAGTASVGTIPTSTSVPGIMVKEDATKIFTDNLQTSGAYCAREENLRREEEAGKLKFVCLSNDGVDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQYARDEDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYPGFDFQKKEAGIPKKSIKVEDIPGLREAGWTPDQWGHSRFRSLSVSTDSAANQKHLTAFMRSLLKSLLLSCIQSMHDHADAWPFREPVDARDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANARTYNSPDTIYYKCATRHDAPSRLFFLSFPFPVQFDM 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4062g00004 555 Pfam Acetyltransferase (GNAT) family 243 321 IPR000182 GO:0016747
Pral4062g00004 555 CDD Bromo_gcn5_like 455 535 - -
Pral4062g00004 555 FunFam Histone acetyltransferase KAT2A 193 357 - -
Pral4062g00004 555 SMART bromo_6 440 540 IPR001487 GO:0005515
Pral4062g00004 555 MobiDBLite consensus disorder prediction 56 71 - -
Pral4062g00004 555 ProSitePatterns Bromodomain signature. 464 522 IPR018359 -
Pral4062g00004 555 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 196 350 IPR000182 GO:0016747
Pral4062g00004 555 Pfam Bromodomain 457 534 IPR001487 GO:0005515
Pral4062g00004 555 CDD NAT_SF 243 297 - -
Pral4062g00004 555 Gene3D - 420 538 IPR036427 GO:0005515
Pral4062g00004 555 MobiDBLite consensus disorder prediction 1 102 - -
Pral4062g00004 555 MobiDBLite consensus disorder prediction 79 98 - -
Pral4062g00004 555 ProSiteProfiles Bromodomain profile. 459 530 IPR001487 GO:0005515
Pral4062g00004 555 Gene3D - 192 356 - -
Pral4062g00004 555 SUPERFAMILY Bromodomain 438 535 IPR036427 GO:0005515
Pral4062g00004 555 PANTHER GH11602P 18 535 IPR037800 GO:0004402
Pral4062g00004 555 MobiDBLite consensus disorder prediction 1 35 - -
Pral4062g00004 555 PRINTS Bromodomain signature 476 492 IPR001487 GO:0005515
Pral4062g00004 555 PRINTS Bromodomain signature 511 530 IPR001487 GO:0005515
Pral4062g00004 555 PRINTS Bromodomain signature 462 475 IPR001487 GO:0005515
Pral4062g00004 555 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 215 351 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4062g00004 Pral-Chr4062 60196 66205 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pral4062g00004 Bromodomain 5.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4062g00004 K06062 - gmx:100813942 838.95