Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4052g00011 ATGGCTGGGATTGATGATAATGTTCCTTTAACTAGCGACTGGGGTCCTCCTAGTCCGAGTCCAAGAACCTTTTTCTCCAAAATGCTGGGTGGGGATAATCTTACAAGACAAATCTCAGAGCCTCCTGCAAGTGGTAGAACTGAAGAGCCCTTTCTGCAACAAAATCAAGAGCTCATTATGAGTGGAAATTTAAACACAAGAGATACAGCACCACAAGATGACGCTTCTGATGGCCAATTAACTGACACAACTTCTTTGTCTGAGAACAAGTCTAGCTCACGTGGAAACCTTGTTGAAAGAATGGCTGCTAGAGCTGGATTTAATGCCCCAAGGTTGAATACAGAAAGCATTAGATCAGCTGATCCTACAATGAATTCTGATACTCGATCTGCTTACTTCACCATACCACCTGGCCTCAGTCCGACCACACTTTTGGAGTCTCCAGTGTTCCTTTCTAATTCACTGGCACAACCGTCTCCAACAACTGGAAAATTTCCATTCATCTCAAATGGCAACTTCCGGGGGTTAGAGCCGAACTCTGGTGCTCCTGAGAAAGCTAAAGTTAACAACTTTGATGACATTTATGCATCATCATTTGCTTTCAAGACTACAACAGATTCGGGCTCTTTCTATAATGGCGCTGCTAGAAAAATGAATCCGACCACGCTGCCAGAACAACATCTTACTAATGAGGTCTCAGCTCCAGATTTGACTGATCCTCCCACTCAAAATGATAGTAGAGCATCAGTCGAGGAACCAGCAGATGAAGAGGGAGGTCAAGGAGGAAATGGAGATTCACAGGCTACGGGTGTTGGGGGCACACCATCTGAAGATGGGTATAACTGGAGAAAGTACGGACAGAAACAAGTAAAAGGTAGTGAGTATCCACGAAGTTACTACAAATGTACGGCTACAAATTGTCCGGTAAAGAAGAAAGTGGAACGATCTCATGAGGGCCACATAACAGAAATCATCTACAAGGGGAATCACAACCATCCAAAACCGCCCACCAATCGCAGATCTGCAATAGGGTCTGTTAACCCCCTCTCTGAAATGCAAGCGGACGTATCTGAAAGTACTGAACCACATGGTGGGGGTGATGGTGAACTAGGCTGGGCAAGCAGACAAAAAGGAAATACAGCTAGTGATGCTGATTGGAAGCATGAGAACCTTGAAGTGACCTGTTCAGCAGCAGCATCTGGGGGCCCTGAATTCGGCAACCAGTCCACCAATTTGCAGGGTCAGAATGGTACCCAATTTGAATCGGGAGATGCAGTGGATGCCTCTTCTACCTTCTCTAATGATGAGGATGATGATGATAGGGGCACTCATGGCAGTGTATCAGTAGGTTATGATGGAGAAGGAGATGAATCAGAATCTAAAAGAAGAAAACTGGAATCTTATCCAAATACAGCAGAATTGAGTGGAGCCACTAGAGCTATTCGGGAGCCTAGAGTAGTTGTTCAAACTACCAGTGAAGTGGATATCCTTGACGATGGATATCGCTGGCGTAAATACGGACAAAAAGTAGTCAAAGGAAATCCCAATCCCAGGAGTTACTACAAGTGCACCAACGTAGGTTGCACAGTAAGGAAGCACGTGGAAAGGGCCTCACATGACCTGAAATCTGTGATCACTACATATGAAGGAAAGCACAATCATGATGTTCCTGCCGCTCGCAATAGCAATCAAGGCAATGCTGTAGCTTCTAGTGCTACTGCTCAAGCATCTTCTGTTATTCATAATCACAGAGCCGAAGTTTCACAACTTCATAGCAGTATTGGGAGGCTTGAGAGGCCTGTTTTGGGCCTGGGTTCGTTCAACTTACCCGGGCCCGGGAAGCCCCAGCTAGGGCCTTCCAGTGGCTTTTCCTTTGGAATTGGAATGAATCAATCAGGCTTTCCCAATATAGCCGCCATGGCAGCTTTGGGGCCGGGCCAGCCCAAGCTTCCTGTCATGCCTGTTCATCCATTCTTGCCCAATCAAGGTCCACCAAACATGGGCTTCATGTTGCCCAAAGGAGAGCCCAATTTGGAGCCCATTCCAGACCGCGGGCTTAATGTGCCTGCTGGTTCGTCAGCATATCAAGATATAATGAGTCGGATGCCACTTGGACCTCATATGTAA 2127 0.464 MAGIDDNVPLTSDWGPPSPSPRTFFSKMLGGDNLTRQISEPPASGRTEEPFLQQNQELIMSGNLNTRDTAPQDDASDGQLTDTTSLSENKSSSRGNLVERMAARAGFNAPRLNTESIRSADPTMNSDTRSAYFTIPPGLSPTTLLESPVFLSNSLAQPSPTTGKFPFISNGNFRGLEPNSGAPEKAKVNNFDDIYASSFAFKTTTDSGSFYNGAARKMNPTTLPEQHLTNEVSAPDLTDPPTQNDSRASVEEPADEEGGQGGNGDSQATGVGGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTATNCPVKKKVERSHEGHITEIIYKGNHNHPKPPTNRRSAIGSVNPLSEMQADVSESTEPHGGGDGELGWASRQKGNTASDADWKHENLEVTCSAAASGGPEFGNQSTNLQGQNGTQFESGDAVDASSTFSNDEDDDDRGTHGSVSVGYDGEGDESESKRRKLESYPNTAELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNVGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNSNQGNAVASSATAQASSVIHNHRAEVSQLHSSIGRLERPVLGLGSFNLPGPGKPQLGPSSGFSFGIGMNQSGFPNIAAMAALGPGQPKLPVMPVHPFLPNQGPPNMGFMLPKGEPNLEPIPDRGLNVPAGSSAYQDIMSRMPLGPHM 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4052g00011 708 MobiDBLite consensus disorder prediction 30 96 - -
Pral4052g00011 708 SMART WRKY_cls 276 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4052g00011 708 SMART WRKY_cls 497 556 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4052g00011 708 MobiDBLite consensus disorder prediction 231 248 - -
Pral4052g00011 708 MobiDBLite consensus disorder prediction 1 125 - -
Pral4052g00011 708 MobiDBLite consensus disorder prediction 401 430 - -
Pral4052g00011 708 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 145 577 IPR044810 GO:0003700
Pral4052g00011 708 MobiDBLite consensus disorder prediction 231 283 - -
Pral4052g00011 708 Gene3D WRKY domain 266 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4052g00011 708 ProSiteProfiles WRKY domain profile. 277 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4052g00011 708 MobiDBLite consensus disorder prediction 351 386 - -
Pral4052g00011 708 FunFam WRKY transcription factor 33 484 550 - -
Pral4052g00011 708 SUPERFAMILY WRKY DNA-binding domain 274 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4052g00011 708 SUPERFAMILY WRKY DNA-binding domain 489 557 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4052g00011 708 ProSiteProfiles WRKY domain profile. 492 557 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4052g00011 708 Gene3D WRKY domain 484 550 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4052g00011 708 Pfam WRKY DNA -binding domain 498 554 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4052g00011 708 Pfam WRKY DNA -binding domain 277 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4052g00011 708 FunFam WRKY transcription factor 266 336 - -
Pral4052g00011 708 MobiDBLite consensus disorder prediction 398 471 - -
Pral4052g00011 708 MobiDBLite consensus disorder prediction 454 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4052g00011 Pral-Chr4052 222059 227029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4052g00011 1 703 WRKY Transcription Factor Family AT5G56270 49.206 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4052g00011 WRKY 8.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4052g00011 K18835 - gmx:100796545 920.613