Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4048g00027 ATGGCGCTCAAATCTTCTGCAGTCGAACTCCGCATCGCCGACATCATACACTCTCATGGCCGCCCAATCACCCTGTCCCAGCTGGCGGCCTCCTTGGAATCTCCTACCTCCCCAGATATCCCTTACCTCTTCCGCATCATGAGATCACTCGTCCGCAAGGAGATCTTTACCCTCCACCATCCATCCGACGGCGGTGACGCTCTCTATGGCCTGACGGAGGCGTCCAAGTGGCTCCTCCATGGTTCTCAGTTCAGCTTGGCTCCGATGGTGATAATGGAAAACCATCCATGGCAGCTTGCCCCGTGGCATTATTTGAGTGCGTGCGTCAGAGAAGGTGGGATCGCCTTCGAGAAGGCTCACGGGTGCGAGATGTGGGACTTCGCCTCTAAAAACGCAGCGTTTAACAAGATATTCAACGATGCATTGGCATGCACGAGTAAGTTCATCACGGAAGCGTTGCTGCGCGAGTACAGAGACGGGTTCACCAACATAGAAACATTGGTGGACGTCGGTGGTGGGACCGGTGGCGCCATGGCGGAGATCGTGAAGTCATACCCACACATCAAAGGAATCAACTCGACTCGATCATGCCACCGCCATGTCATCGCCGCAGCCGATGAGTACCCCGGAGTCACCCATGTCGGCGGTGACATGTTCCAGTCCATTCCTGCAGTTGATGCCATTCTCCTTAAGTGCGTTCTGCATGATTGGAGCGATGAGCACTGCATGAAGATTCTTCAGAACTGCAAAAGGGCGGTGGCGGAGAAGAAGGGGAAGATCGTAATAGTGGAGATAGTGTTGGAGGAAGAAGATGACTGTGGCGTGTTTGGCAACACAAAGATGGCATATGACCTGCTCATGATGGCGCACACAACGGGGGGAAAGGAGAGAAGTGAAGCTGAATGGTGCACCTTATTGAAGGAAGCCGGTTTTGGTCGTTACAACATCATCAAAATCCCTACTATACCATCCGTTATTGAGGCTTTCCCTTTTAAAAAGCATCTCTCGCTGGGTATAAAAAAGTGTACTCTGTTAGGTTGTAGCATAATACACGCTAGAACTTAG 1065 0.5202 MALKSSAVELRIADIIHSHGRPITLSQLAASLESPTSPDIPYLFRIMRSLVRKEIFTLHHPSDGGDALYGLTEASKWLLHGSQFSLAPMVIMENHPWQLAPWHYLSACVREGGIAFEKAHGCEMWDFASKNAAFNKIFNDALACTSKFITEALLREYRDGFTNIETLVDVGGGTGGAMAEIVKSYPHIKGINSTRSCHRHVIAAADEYPGVTHVGGDMFQSIPAVDAILLKCVLHDWSDEHCMKILQNCKRAVAEKKGKIVIVEIVLEEEDDCGVFGNTKMAYDLLMMAHTTGGKERSEAEWCTLLKEAGFGRYNIIKIPTIPSVIEAFPFKKHLSLGIKKCTLLGCSIIHART 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4048g00027 354 Gene3D Vaccinia Virus protein VP39 80 330 IPR029063 -
Pral4048g00027 354 CDD AdoMet_MTases 166 267 - -
Pral4048g00027 354 SUPERFAMILY "Winged helix" DNA-binding domain 6 81 IPR036390 -
Pral4048g00027 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 83 328 IPR029063 -
Pral4048g00027 354 Gene3D - 1 78 IPR036388 -
Pral4048g00027 354 Pfam O-methyltransferase domain 102 311 IPR001077 GO:0008171
Pral4048g00027 354 PIRSF O-mtase 1 331 IPR016461 GO:0008168
Pral4048g00027 354 FunFam O-methyltransferase family protein 80 329 - -
Pral4048g00027 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 330 IPR016461 GO:0008168
Pral4048g00027 354 PANTHER O-METHYLTRANSFERASE 2 313 IPR016461 GO:0008168
Pral4048g00027 354 Pfam Dimerisation domain 1 51 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4048g00027 Pral-Chr4048 111457 112630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4048g00027 1 317 Monolignol Biosynthesis Gene Families AT5G54160 36.646 2.74e-68 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4048g00027 K22588 - jre:109000529 444.121