Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4048g00026 ATGGGAGAGAGTGCAACGGGAGAGGCAGAGGCTTTGTTATTACAGGGTCAAGCTGATATATGGAAGTACATGTTCAGCTTCGCAGATTCCATGGCCCTCAAATCCGCCGTGGAGCTCCGCATTCCCGACATTATACACCGCCACGGCGGTCCAATCACCTTGTCTCAGATCACCGCCTGCTTCTCCGACGCTCCCTCTCCCGACACCGCATACCTCGCCCGCCTCATGAGGCTCCTCGTCCGCCGCAACATCTTCACAGCCCACCACCCCTCCGACGGAGGAGACACCCTCTACGGCCTCACCCACTCTTCTCGGTGGCTGCTAAGCGACTCCGACCTTAACCTGGCACCCATGCTTCTCATGGAGAATCACCCCGACCTTATGGCTCCCTGGCACTGCTTCAGCGACTGCGTGAGAGATGGAGGCGTGGCGTTCAAGAAGGCTCACGGCCAAGAGATTTGGGAGATGGCGGCAGAGAACCCAGAATTCAACAAGCTTTTCAATGCTGGGATGGCGTGTACGGGTAGGACGGCGATGATGGCGATCGTATCGGCGTATAAGGAAGGGTTCGAGAGCATTGGATCGCTGGTTGATGTGGGAGGTGGCACCGGAGGAACAGTGTCGGAAATTGTGAAAACGTATCCCCACATCAAAGGTATTAACTTTGATCTGCCTCATGTGGTGGCCACCGCACCTGAATACGACGGCGTCACCCACGTCGGAGGAGACATGTTCCACTCCATCCCACCTGCGGATGCCGTTTTCATGAAGTGGCTGCTGCATGACTGGAGCGACGAAGACTGTATAAAGATACTGAAGAACTGCAAGAAAGCGGTGGCAGAGGATAAAGGGAAGGTGATAATAGCAGAGTTTGTGCTGAAGCCAGAGGGCAATGGGCTGTTCGATGACATCGGATTGCTCTTCGACTTGCTGATGATTGCTCATTCCTCCGGTGGAAGAGAGAGGACTGAGTCGGAGTGGAAGAATCTGCTAAATCAAGCTGGCTTCCCTCGCTATCAAATCATCAACACACCCTCTTTCTTATCTATCATCGAGGCTTATCCTATCTGA 1071 0.5415 MGESATGEAEALLLQGQADIWKYMFSFADSMALKSAVELRIPDIIHRHGGPITLSQITACFSDAPSPDTAYLARLMRLLVRRNIFTAHHPSDGGDTLYGLTHSSRWLLSDSDLNLAPMLLMENHPDLMAPWHCFSDCVRDGGVAFKKAHGQEIWEMAAENPEFNKLFNAGMACTGRTAMMAIVSAYKEGFESIGSLVDVGGGTGGTVSEIVKTYPHIKGINFDLPHVVATAPEYDGVTHVGGDMFHSIPPADAVFMKWLLHDWSDEDCIKILKNCKKAVAEDKGKVIIAEFVLKPEGNGLFDDIGLLFDLLMIAHSSGGRERTESEWKNLLNQAGFPRYQIINTPSFLSIIEAYPI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4048g00026 356 Gene3D Vaccinia Virus protein VP39 109 356 IPR029063 -
Pral4048g00026 356 Gene3D - 2 107 IPR036388 -
Pral4048g00026 356 FunFam O-methyltransferase family protein 109 354 - -
Pral4048g00026 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Pral4048g00026 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 354 IPR029063 -
Pral4048g00026 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 355 IPR016461 GO:0008168
Pral4048g00026 356 Pfam Dimerisation domain 31 80 IPR012967 GO:0046983
Pral4048g00026 356 Pfam O-methyltransferase domain 131 336 IPR001077 GO:0008171
Pral4048g00026 356 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Pral4048g00026 356 PANTHER O-METHYLTRANSFERASE 14 338 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4048g00026 Pral-Chr4048 97904 100199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4048g00026 31 352 Monolignol Biosynthesis Gene Families AT5G54160 41.768 7.60e-85 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4048g00026 K22588 - tcc:18608674 525.398