Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4048g00025 ATGGGAGAATATGCTAATGGAGAGGAGGCCCTGGCATTACAAGGTCAAGCTCTTGTTTGGAGCTGCATGTTCAGTTTTGTAGATTCCATGGCCCTCAAATGCGCCGTGGAACTCCGCATTCCCGACATTATACACCGTCACGGCGGACCTATCTCCCTGTCCCAGATCACCGCCTCTCTCGCCGACGCTCCTTCTCCCGACCCTACCTCCCTCGCCCGAGTCATGAGGCTCCTCGTCCGCCGCAACATCTTCACTGCCCACCACCCCTCCGACAGCGGAGACACCCTCTATGGCCTCACCCACTCTTCTCGGTGGCTCCTGAGTGACTCTGACTTGAACCTCGCTCCCGCGCTTCTCATGCAGAACCATCCCGCCCTTGTGGCTCCCTGGCACTACCTGAGTCATTGCGTCAGAGAAGGTGGCCCGGCGTTCAAGAAGGCCCATGGCCGGGAGATCTGGGAGTTAGCATCGGAGAGCCCAGAGTTCAACAAGCTGTTCAATGATGGGATGGCGTGTACGGCGAGGATGGCGATGAGGGCGGTCGTATCGGCGTACAAGGAAGGGTTCGAGAGCATCGGATCTTTGGTGGATGTGGGAGGGAACATCGGAGGGACGGCGTCGGAGATAGTGAAAGCGTATCCGCACATAAAGTGCATCAACTTCGATCTGCCTCATGTGATCGCCACCGCACCTGAACACGACGGAGTCACCCATGTCGGAGGAGACATGTTCCACTCCATCCCTCCTGCCGATGCTGTCTTCATGAAGTGGATACTGCACGATTGGAGCGACGAAGATTGCATAAAGATACTGAAGAACTGCAAGAAGGCAATAGAAGAAGTGAGAGGGAAGGTGATAATTGCAGAGTTTGTTCTGAAACCAGAAGGAAGGGACTTGTTCGACGAGACAGGGCTGGTCATCGATTTGTTGATGATTGCTCATTCTTCAGGTGGAAAAGAGAGGACCGAATTGGAGTGGAAGGATCTACTGCACCGAGCTGGCTTCCCTCGTTATCGAATCATCCAAACACCCTCTTTCTTATCCATCATTGAGGCTTCCCCGTTCTGA 1068 0.5459 MGEYANGEEALALQGQALVWSCMFSFVDSMALKCAVELRIPDIIHRHGGPISLSQITASLADAPSPDPTSLARVMRLLVRRNIFTAHHPSDSGDTLYGLTHSSRWLLSDSDLNLAPALLMQNHPALVAPWHYLSHCVREGGPAFKKAHGREIWELASESPEFNKLFNDGMACTARMAMRAVVSAYKEGFESIGSLVDVGGNIGGTASEIVKAYPHIKCINFDLPHVIATAPEHDGVTHVGGDMFHSIPPADAVFMKWILHDWSDEDCIKILKNCKKAIEEVRGKVIIAEFVLKPEGRDLFDETGLVIDLLMIAHSSGGKERTELEWKDLLHRAGFPRYRIIQTPSFLSIIEASPF 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4048g00025 355 Gene3D - 3 106 IPR036388 -
Pral4048g00025 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 352 IPR029063 -
Pral4048g00025 355 PANTHER O-METHYLTRANSFERASE 16 337 IPR016461 GO:0008168
Pral4048g00025 355 Gene3D Vaccinia Virus protein VP39 108 353 IPR029063 -
Pral4048g00025 355 Pfam O-methyltransferase domain 130 335 IPR001077 GO:0008171
Pral4048g00025 355 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Pral4048g00025 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 354 IPR016461 GO:0008168
Pral4048g00025 355 Pfam Dimerisation domain 30 79 IPR012967 GO:0046983
Pral4048g00025 355 SUPERFAMILY "Winged helix" DNA-binding domain 11 110 IPR036390 -
Pral4048g00025 355 FunFam O-methyltransferase family protein 108 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4048g00025 Pral-Chr4048 91235 93319 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4048g00025 30 351 Monolignol Biosynthesis Gene Families AT5G54160 42.988 1.42e-86 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4048g00025 K22588 - qsa:O6P43_028783 522.702