Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4047g00057 | ATGGGCTGCATATGTTCCAAGACATCAGCTGTGGAAGACAGCCGAGAAGACTTGACGAGGAAATCATTATCTAGCAAGAGAGGGTCAGAGCTGCGTGTTTCAAGGTTGAATTCCTCCAAAAGAAATGAGGGTGTTTGGGCAACTGATAAATTAGTTGGAAATGATGTGAAGATTTCATTGATTGACAAGAAAACCAATGGCTCATTTCAGTTGTATGATGATCGAATGGGGAATAAGGAAATAGAGAAGCCTGAATTAACTGTCCTTAACAATCCCGGTCTTGGAAAGGTTCCAAAGGCTGCAGAAGGAGAGCAGGTTGCAGCAGGATGGCCGAATTGGCTTTCTTCTGTGGCTGGTGAAGCTATCAAGGGATGGATACCTCGGAGCGCCAATACTTTTGAGAAGTTAAATAAAATTGGACAAGGAACTTACAGTACTGTTTATAAAGCACGTGATTTGACTCATCAAAAGATTGTTGCTTTGAAGAGAGTTCGGTTTGATAATCTTGATCCTGAGAGTGTAAAGTTTATGGCAAGGGAAATCCTCCTTCTACGCAGACTCGACCATCCAAATATTATCAAGTTGGAAGGCTTGATAACATCTCAGACCTCTCGCAGCTTGTACCTCATTTTTGAGTATATGGAGCATGACCTTTCTGGACTAGCATCACGTCCTGGCATTAAGTTTTCTGAACCACAGGTCAAGTGCTACATGCAACAACTTCTTAGTGGATTGGATCATTGTCATAGTCGTGGTGTCCTCCACCGTGACATAAAGGGCTCAAACCTTCTCATTGACAACAATGGCATCTTAAAAATTGCAGATTTTGGGTTGGCAAGTTTCTTTGATCCCAATCATAGTGTTCCATTAACCAGTCGAGTAGTTACTCTCTGGTATAGACCACCGGAACTTTTACTTGGAGCATCTCATTATGGAGTTGCGGTAGATTTGTGGAGCACTGGTTGCATACTTGGGGAACTATATACTGGCAGGCCTATATTGCCAGGAAAAACTGAGGTTGAGCAACTGCACAGGATTTTCAAGCTTTGTGGATCACCATCTGAGGACTATTGGCTTAAACAACGATTGCCACATGCTGCAGTATTCAGGCCTCCACATCGGTACAGACGGTGTATTGCAGAAACATTTAAAGAATATCCATCTGCTTCAGTGAGGCTCATAGAGACACTACTTTCTGTAGATCCTGCACAACGAGGGACCGCAGCAGGTGCCCTAAAAAGTGAGTTCTTCACTACTGAGCCCTTTGCTTGTGATCCATCAAGTTTACCAAAGTATCCTCCCAGCAAAGAGATTGATTCCAAATTACGGGATGAAGAAGCCAGAAGGCAAGGAGCTATGGGAGGAAGGGAGCAGAAAGTTGGCTCAGGAGTTAGAAAAGAAAAGGAACCTGGGTTAACTGTTTCATCAAAGCAATATGTTGACCCCCGTATATCAACGCAGCAGGGACAACGTTCCAATTCAAAGAGCCGAAGTGAAGTGTTTAACCCCCACAGAGAACCTGTTTCTGGATTTTTGGTTTATCCCCCCCAAAAACAGTCACATGTTAAAGAAATGGAAAATAATTTCAGTGGGCATCTTTATAAGAGGCCTTCACATTCAGGTCCACTGGTTCCGGGTGTTCAATTAGCAAGGGGTGGAAAGGAATTTGATGAAGGGCCTCTTGGTTCGAACAGAGTCAACTTGGCCAAACTATCTGGCTTAGTTGCCTCGAGGACTTCATCATCCGAAGATCAGGAGGAAAAACCAATTTCCATGCTGCCTAGAAAAACAATTGAAGTTAAAAAATCCGTGGAGTCAAATAATGTATCAGAGTCAAGAAGGCATGATAGGAAACGCCAGTCACCACGAATTGCGGATCTCGGTCAAGTAGAAAATGCAAGAGGCTCCACTCAAGAATTGACTCCGGGAGGCCGTGGCTACATGGAAAACAAGATCTATCTCTCTGGTCCATTGCTAGCTTCTGCAAACAACATGGATCAGATGCTTAAAGAGCATGATCGAAAGATCCAAGAATTTTCAAGACGAGCACGAATTGACAAGTCAAGAGGTGGGAAAATTCGTGCTTTGAGAAAGTAG | 2097 | 0.4354 | MGCICSKTSAVEDSREDLTRKSLSSKRGSELRVSRLNSSKRNEGVWATDKLVGNDVKISLIDKKTNGSFQLYDDRMGNKEIEKPELTVLNNPGLGKVPKAAEGEQVAAGWPNWLSSVAGEAIKGWIPRSANTFEKLNKIGQGTYSTVYKARDLTHQKIVALKRVRFDNLDPESVKFMAREILLLRRLDHPNIIKLEGLITSQTSRSLYLIFEYMEHDLSGLASRPGIKFSEPQVKCYMQQLLSGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPNHSVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSTGCILGELYTGRPILPGKTEVEQLHRIFKLCGSPSEDYWLKQRLPHAAVFRPPHRYRRCIAETFKEYPSASVRLIETLLSVDPAQRGTAAGALKSEFFTTEPFACDPSSLPKYPPSKEIDSKLRDEEARRQGAMGGREQKVGSGVRKEKEPGLTVSSKQYVDPRISTQQGQRSNSKSRSEVFNPHREPVSGFLVYPPQKQSHVKEMENNFSGHLYKRPSHSGPLVPGVQLARGGKEFDEGPLGSNRVNLAKLSGLVASRTSSSEDQEEKPISMLPRKTIEVKKSVESNNVSESRRHDRKRQSPRIADLGQVENARGSTQELTPGGRGYMENKIYLSGPLLASANNMDQMLKEHDRKIQEFSRRARIDKSRGGKIRALRK | 698 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4047g00057 | 698 | SMART | serkin_6 | 133 | 417 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral4047g00057 | 698 | MobiDBLite | consensus disorder prediction | 436 | 453 | - | - | |
Pral4047g00057 | 698 | FunFam | probable serine/threonine-protein kinase At1g54610 | 120 | 215 | - | - | |
Pral4047g00057 | 698 | Gene3D | Phosphorylase Kinase; domain 1 | 120 | 215 | - | - | |
Pral4047g00057 | 698 | MobiDBLite | consensus disorder prediction | 576 | 644 | - | - | |
Pral4047g00057 | 698 | MobiDBLite | consensus disorder prediction | 478 | 497 | - | - | |
Pral4047g00057 | 698 | ProSiteProfiles | Protein kinase domain profile. | 133 | 417 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral4047g00057 | 698 | Gene3D | Transferase(Phosphotransferase) domain 1 | 216 | 455 | - | - | |
Pral4047g00057 | 698 | MobiDBLite | consensus disorder prediction | 427 | 502 | - | - | |
Pral4047g00057 | 698 | Pfam | Protein kinase domain | 133 | 417 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral4047g00057 | 698 | FunFam | probable serine/threonine-protein kinase At1g54610 | 216 | 457 | - | - | |
Pral4047g00057 | 698 | MobiDBLite | consensus disorder prediction | 679 | 698 | - | - | |
Pral4047g00057 | 698 | Coils | Coil | 662 | 682 | - | - | |
Pral4047g00057 | 698 | PANTHER | CELL DIVISION PROTEIN KINASE | 131 | 422 | - | - | |
Pral4047g00057 | 698 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 253 | 265 | IPR008271 | GO:0004672|GO:0006468 | |
Pral4047g00057 | 698 | ProSitePatterns | Protein kinases ATP-binding region signature. | 139 | 162 | IPR017441 | GO:0005524 | |
Pral4047g00057 | 698 | SUPERFAMILY | Protein kinase-like (PK-like) | 126 | 423 | IPR011009 | - | |
Pral4047g00057 | 698 | MobiDBLite | consensus disorder prediction | 581 | 624 | - | - | |
Pral4047g00057 | 698 | CDD | STKc_CDK9_like | 133 | 417 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4047g00057 | Pral-Chr4047 | 378040 | 383981 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4047g00057 | 125 | 494 | Core Cell Cycle Gene Families | AT5G10270 | 44.819 | 1.92e-112 | 347 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CRK7-CDK9 | Pral4047g00057 | Pkinase | 1.4e-67 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4047g00057 | - | - | gmx:100814156 | 998.808 |