Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4047g00054 ATGGAAAAGCATTTCAAAATGACCTCACTTGCTCTTCTCTCTCTTATCACCCTTCTTCACTCGAAAACTACATGGAGCTCTGTGTCTGCAACTGAATTTGTCTACAACACAGACTTCAAATCTTCTAACATTTTCCTATGTGGAAACTCTTCTATTCAGTCATCTATTCTGGTTCTTAGTAATCGTAGTTTCTTCTCCATAAGCCGAGCTTTTTACCCTTACAAAATACCCACTAAAGCAGCTAACTCTTCTACTCCTCTTCCCTTTGCAACTTCCTTCATTTTCTCTATTGCTCCCATTAAACATTTTCTCACTGGTCATGGCTTTGCTTTCATATTCTCACCTACTAGGGGCTTAAACGGCACGACCTCATCTCAGTACATTGGCTTTTTGAACTTCACTAATGAAGGTAATCCTCAAAACCATGCTTTTGGAGTTGAGTTTGATGTCAGGAAAAATGTAGAATTCAATGACATAAACGACAATCATGTTGGCATAGACATAAACTCTCTTACTTCCTTTACTTCACATGATGCGGGTTACTGGGGTGGGGAAAATGATAAGGAATTCAAGAGGTTGAAGTTAAACAATGGAGTAAATTACCAGGTCTGGATTGAGTTTGTAGATTCACAGTTTAATGTCACAATGGCTCAAGCAGGAAGAAAAAGACCCAAAAAACCTCTGATTAGCAAAAAAATCAATCTTTCAGAGGTTTTTCTAGATCAAATGTATGTTGGGTTTTGTGCATCGACGGGTCTACTGATGGATACTACAAGAATCATGGGTTGGAGTTATAGTAATTCAAATTTTTCAATAGGTGATGCTTTGATCACAACCGATCTGCCTTCATTTGTGCATCAGAAAGGGTTTTTTTCTGGATCAAGAGCTCCTTTCATAGGCTTAGTTGTTGTCTGCATGATACTCATAGGCTGTGTGTCTCTGGGATGCTTCATTTTATGGAGAGGGATTGGCAAATCAGAGGAGGAAGATTTAGAAGAATGGGAGTTAGAGTATTGGCCCCATAGGATTACTTACCAAGAGATTATTGCAGCAACAAGTGGGTTCTCAGAAGAGAAGGTGATAGGAATAGGAGGGAATGGAAAAGTATATAAAGGGGTCTTGCAGGGAGTAGAAGTTGCAGTCAAGAGAATCTCTCATGAAACAGAATCAGGAATAAGAGAGTTCTTGGCTGAAATTTCAAGCTTGGGAAGACTGAAACACAGAAATCTGGTGAACTTCAGAGGTTGGTGCAAAAGAGAAAAGGGAAGTTTCATAATAGTCTATGACTACATGGAGAATGGTAGTTTAGATAAATGGATCTTTGAAAGTGAGGAAGGTAGAAAGTTGCTGACTTGGGAAGAGAGGATTCAAGTTCTAAAGAATGTAGCTTCTGGGATTCTATACCTGCATGAGGGTTGGGAAGTTAAGGTCTTGCATAGAGACATCAAATCCAGCAATGTTCTACTTGACAAAGATATGAATGCAAGACTGGGAGATTTCGGATTGGCTCGCATGCATGATCATCATGGGAAGATAGCAACCACAACAAAAGTGATTGGAACTATAGGGTACATAGCCCCAGAAGTGGTCAAGTCAGGAAGAGCATCAACACAAACTGATGTTTTTGGTTTTGGAATATTAGTCTTAGAGGTGGTTTGTGGCAGAAGACCAATTGAAGAAGGTAAGCCGGGGTTGCCTGAGTGGTTAATGTCCCTAATGGAGATTGATGAGTTACACTGTGCTCTTGATGAGAGGTTAAAGTCCAAAGGAGGATGTGACATTGAGGAGGTGGAAAGAATGCTTCGTTTGGGTTTGCTTTGTGCAAATTCTGATCCCAATGTTAGGCCTACAATGAGGCAAGTGGTTAATATGCTGGAAGGAGAATTTGAAGGCAATGAGACAGAACAGAACAGTAAGGGAGAGAATTTGCTTGAGAAAATAAAATCAGCAGCAATGTGGTCTGAAACTGCTCTCGCTTTTTGTAACACAAGACACCCAAGATTTGAGGACTTGATGTTCAGTTCTTATTCTAAAACTTCTGGAAGTAACTCATGTGCCATCCCTGACTCAGAGATCATCCTAGAAGAAGGGAGGTAG 2097 0.402 MEKHFKMTSLALLSLITLLHSKTTWSSVSATEFVYNTDFKSSNIFLCGNSSIQSSILVLSNRSFFSISRAFYPYKIPTKAANSSTPLPFATSFIFSIAPIKHFLTGHGFAFIFSPTRGLNGTTSSQYIGFLNFTNEGNPQNHAFGVEFDVRKNVEFNDINDNHVGIDINSLTSFTSHDAGYWGGENDKEFKRLKLNNGVNYQVWIEFVDSQFNVTMAQAGRKRPKKPLISKKINLSEVFLDQMYVGFCASTGLLMDTTRIMGWSYSNSNFSIGDALITTDLPSFVHQKGFFSGSRAPFIGLVVVCMILIGCVSLGCFILWRGIGKSEEEDLEEWELEYWPHRITYQEIIAATSGFSEEKVIGIGGNGKVYKGVLQGVEVAVKRISHETESGIREFLAEISSLGRLKHRNLVNFRGWCKREKGSFIIVYDYMENGSLDKWIFESEEGRKLLTWEERIQVLKNVASGILYLHEGWEVKVLHRDIKSSNVLLDKDMNARLGDFGLARMHDHHGKIATTTKVIGTIGYIAPEVVKSGRASTQTDVFGFGILVLEVVCGRRPIEEGKPGLPEWLMSLMEIDELHCALDERLKSKGGCDIEEVERMLRLGLLCANSDPNVRPTMRQVVNMLEGEFEGNETEQNSKGENLLEKIKSAAMWSETALAFCNTRHPRFEDLMFSSYSKTSGSNSCAIPDSEIILEEGR 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4047g00054 698 Pfam Protein kinase domain 356 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4047g00054 698 SMART serkin_6 355 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4047g00054 698 ProSiteProfiles Protein kinase domain profile. 355 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4047g00054 698 PANTHER - 49 629 - -
Pral4047g00054 698 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 268 IPR013320 -
Pral4047g00054 698 Gene3D - 29 277 - -
Pral4047g00054 698 FunFam L-type lectin-domain containing receptor kinase S.4 29 273 - -
Pral4047g00054 698 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 319 430 - -
Pral4047g00054 698 Pfam Legume lectin domain 31 269 IPR001220 GO:0030246
Pral4047g00054 698 Gene3D Transferase(Phosphotransferase) domain 1 431 644 - -
Pral4047g00054 698 Gene3D Phosphorylase Kinase; domain 1 323 430 - -
Pral4047g00054 698 CDD lectin_legume_LecRK_Arcelin_ConA 31 268 IPR001220 GO:0030246
Pral4047g00054 698 SUPERFAMILY Protein kinase-like (PK-like) 332 626 IPR011009 -
Pral4047g00054 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Pral4047g00054 698 CDD STKc_IRAK 361 627 - -
Pral4047g00054 698 ProSitePatterns Protein kinases ATP-binding region signature. 361 382 IPR017441 GO:0005524
Pral4047g00054 698 FunFam L-type lectin-domain containing receptor kinase S.4 431 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4047g00054 Pral-Chr4047 374245 376590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4047g00054 28 574 Receptor kinase-like Gene Family AT4G04960 58.877 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral4047g00054 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4047g00054 - - gmx:100804553 921.768