Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4047g00034 ATGACTGGCAGAGAAATCCTTCACAAAATGAAGGTGAAAGCAGGGTTCGGGACATCAGGATGCGATCGAGGGAAAGGTAAAAGCAAAATGTCAAAGAACATAACACATGGATTTCACTTGATGAAGGGGAAATCAGCTCATGCTATGGAAGACTATGTAGTTTCAAAGTTCAAGCAAGAGAAGGACAAGGAATTAGGGTTGTTTGCCATATTTGATGGTCACTTAGGCCATGATGTAGCAAGCTATTTGCAGAACAACCTTTTCGACAACATCCTAAAACAGGAAGACTTTTGGACTGAGACAGAAAGTGCAGTGAAGAGAGCTTACCTTATAACAGATGACAAAATATTGGAACAATCATTTGAGTTGGGACGGGGAGGATCAACCGCCGTAACTGCAATACTGATAAATGGTCAGAAACTTGTAGTAGCAAACGTTGGGGATTCTCGAGCTGTTCTTAGCAAGAATGGCAAGCCCAAGCAATTATCCATCGATCACGAGCCAAGCAAGGAAAAAAATATGATCGAGAGCCGTGGTGGTTTCGTCTCAAACATTCCAGGAGATGTGCCTCGTGTAGATGGAAAGCTGGCTGTAGCAAGGGCTTTTGGTGATAAGAGCTTAAAGATGCATCTTACTTCTGAACCTGATGTGATCGTAGAGAATGTTGAAGAAGGCACAGAGTTCCTTATTTTGGCAAGCGATGGAATCTGGAAGGTGATGTCAAACCAAGAAGCAGTGGATTGTATCAGAAAAGCAAAGGATGCTCAGGCTGCAGCGAAGCGCTTGATAGAAGAAGCTGTGGCTAGGAACAGTAAGGATGACATATCCTGCATCATTGTCAAGTTCCAGTAA 852 0.4319 MTGREILHKMKVKAGFGTSGCDRGKGKSKMSKNITHGFHLMKGKSAHAMEDYVVSKFKQEKDKELGLFAIFDGHLGHDVASYLQNNLFDNILKQEDFWTETESAVKRAYLITDDKILEQSFELGRGGSTAVTAILINGQKLVVANVGDSRAVLSKNGKPKQLSIDHEPSKEKNMIESRGGFVSNIPGDVPRVDGKLAVARAFGDKSLKMHLTSEPDVIVENVEEGTEFLILASDGIWKVMSNQEAVDCIRKAKDAQAAAKRLIEEAVARNSKDDISCIIVKFQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4047g00034 283 SMART PP2C_4 25 280 IPR001932 -
Pral4047g00034 283 Gene3D - 20 283 IPR036457 -
Pral4047g00034 283 PANTHER PROTEIN PHOSPHATASE 30 282 IPR015655 GO:0004722|GO:0006470
Pral4047g00034 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Pral4047g00034 283 Coils Coil 249 269 - -
Pral4047g00034 283 SUPERFAMILY PP2C-like 31 282 IPR036457 -
Pral4047g00034 283 CDD PP2Cc 36 282 IPR001932 -
Pral4047g00034 283 FunFam Probable protein phosphatase 2C 39 25 283 - -
Pral4047g00034 283 Pfam Protein phosphatase 2C 46 275 IPR001932 -
Pral4047g00034 283 SMART PP2C_SIG_2 50 282 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4047g00034 Pral-Chr4047 260785 262546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4047g00034 24 283 PP2C-type Phosphatase Gene Family AT4G28400 74.231 1.10e-145 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4047g00034 K17506 - gmx:100819846 455.677